FFCP PHASE1:Hg19::chr7:82172409..82172413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:82172409..82172413,+ | |||
|description=CAGE_peak_at_chr7:82172409..82172413,+ | |description=CAGE_peak_at_chr7:82172409..82172413,+ | ||
|id=chr7:82172409..82172413,+ | |id=chr7:82172409..82172413,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.60e-20!42;CL:0000514!1.60e-20!42;CL:0000680!7.74e-20!57;CL:0000056!7.74e-20!57;CL:0000355!7.74e-20!57;CL:0000359!3.65e-19!32;CL:0000187!3.82e-18!54;CL:0000183!2.17e-16!59;CL:0000393!4.48e-16!60;CL:0000211!4.48e-16!60;CL:1000306!1.23e-15!4;CL:0002547!1.23e-15!4;CL:0000055!1.61e-14!180;CL:0002494!2.44e-14!16;CL:0002589!2.63e-14!2;CL:0002548!1.70e-10!6;CL:0002592!5.99e-10!3;CL:0002590!8.52e-10!3;CL:0000222!1.91e-09!119;CL:0002582!3.52e-09!3;CL:0002598!7.45e-08!1;CL:0000342!1.11e-07!1;CL:0002565!1.11e-07!1 | |ontology_enrichment_celltype=CL:0000192!1.60e-20!42;CL:0000514!1.60e-20!42;CL:0000680!7.74e-20!57;CL:0000056!7.74e-20!57;CL:0000355!7.74e-20!57;CL:0000359!3.65e-19!32;CL:0000187!3.82e-18!54;CL:0000183!2.17e-16!59;CL:0000393!4.48e-16!60;CL:0000211!4.48e-16!60;CL:1000306!1.23e-15!4;CL:0002547!1.23e-15!4;CL:0000055!1.61e-14!180;CL:0002494!2.44e-14!16;CL:0002589!2.63e-14!2;CL:0002548!1.70e-10!6;CL:0002592!5.99e-10!3;CL:0002590!8.52e-10!3;CL:0000222!1.91e-09!119;CL:0002582!3.52e-09!3;CL:0002598!7.45e-08!1;CL:0000342!1.11e-07!1;CL:0002565!1.11e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002589;4.90e-26;2!CL:0002596;4.90e-26;2!CL:0002592;1.12e-17;3!CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0000359;7.86e-13;32!CL:0000192;2.07e-10;43!CL:0000393;3.82e-08;61!CL:0000211;3.82e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,4.32e-26,2;CL:0002589,5.56e-26,2;CL:0002592,1.12e-17,3;CL:0000359,8.02e-15,32;CL:1000306,1.13e-13,4;CL:0002547,1.13e-13,4;CL:0000192,2.84e-11,43;CL:0000514,2.84e-11,43;CL:0000187,5.25e-09,55;CL:0000680,1.39e-08,58;CL:0000056,1.39e-08,58;CL:0000355,1.39e-08,58;CL:0000393,3.34e-08,61;CL:0000211,3.34e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.07e-10;43!CL:0000355;1.90e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001529;4.90e-26;2!UBERON:0005396;4.90e-26;2!UBERON:0007204;4.90e-26;2!UBERON:0004573;2.13e-22;33!UBERON:0004571;2.13e-22;33!UBERON:0003498;1.12e-17;3!UBERON:0005985;1.12e-17;3!UBERON:0001621;1.12e-17;3!UBERON:0001637;9.06e-15;42!UBERON:0003509;9.06e-15;42!UBERON:0004572;9.06e-15;42!UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4!UBERON:0007500;9.49e-09;56!UBERON:0001981;9.49e-09;56!UBERON:0004537;9.49e-09;56!UBERON:0002049;8.09e-07;75!UBERON:0007798;8.09e-07;75 | |||
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|short_description=p@chr7:82172409..82172413,+ | |short_description=p@chr7:82172409..82172413,+ | ||
}} | }} |
Latest revision as of 12:05, 31 July 2015
Short description: | p@chr7:82172409..82172413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:82172409..82172413, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 4.32e-26 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 5.56e-26 | 2 |
smooth muscle cell of the coronary artery | 1.12e-17 | 3 |
vascular associated smooth muscle cell | 8.02e-15 | 32 |
fibroblast of tunica adventitia of artery | 1.13e-13 | 4 |
fibroblast of the aortic adventitia | 1.13e-13 | 4 |
smooth muscle cell | 2.84e-11 | 43 |
smooth muscle myoblast | 2.84e-11 | 43 |
muscle cell | 5.25e-09 | 55 |
muscle precursor cell | 1.39e-08 | 58 |
myoblast | 1.39e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-08 | 58 |
electrically responsive cell | 3.34e-08 | 61 |
electrically active cell | 3.34e-08 | 61 |