FFCP PHASE1:Hg19::chr22:43024232..43024253,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1727 | |EntrezGene=1727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2873 | |HGNC=2873 | ||
|TSSclassifier=strong | |||
|UniProt=Q6TGM5 | |UniProt=Q6TGM5 | ||
|association_with_transcript=-65bp_to_AY421733_5end | |association_with_transcript=-65bp_to_AY421733_5end | ||
|cluster_id=chr22:43024232..43024253,- | |||
|coexpression_cluster_id=C2647 | |||
|description=CAGE_peak_5_at_CYB5R3_5end | |description=CAGE_peak_5_at_CYB5R3_5end | ||
|id=chr22:43024232..43024253,- | |id=chr22:43024232..43024253,- | ||
|ontology_enrichment_celltype=CL:0000055!1.20e-14!180;CL:0000057!9.19e-13!75;CL:0002371!1.34e-11!591;CL:0000222!7.08e-11!119;CL:0000144!3.56e-10!625;CL:0000183!4.22e-08!59;CL:0000136!7.67e-08!15;CL:0000220!8.14e-08!246;CL:0000192!9.92e-08!42;CL:0000514!9.92e-08!42;CL:0002321!1.16e-07!248;CL:0000680!2.43e-07!57;CL:0000056!2.43e-07!57;CL:0000355!2.43e-07!57;CL:0000723!3.98e-07!436;CL:0000187!7.31e-07!54;CL:0000048!8.40e-07!430 | |ontology_enrichment_celltype=CL:0000055!1.20e-14!180;CL:0000057!9.19e-13!75;CL:0002371!1.34e-11!591;CL:0000222!7.08e-11!119;CL:0000144!3.56e-10!625;CL:0000183!4.22e-08!59;CL:0000136!7.67e-08!15;CL:0000220!8.14e-08!246;CL:0000192!9.92e-08!42;CL:0000514!9.92e-08!42;CL:0002321!1.16e-07!248;CL:0000680!2.43e-07!57;CL:0000056!2.43e-07!57;CL:0000355!2.43e-07!57;CL:0000723!3.98e-07!436;CL:0000187!7.31e-07!54;CL:0000048!8.40e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.24e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.47e-14,76;CL:0000222,2.67e-11,121;CL:0000723,1.04e-08,433;CL:0000136,1.86e-08,15;CL:0000048,3.17e-08,427;CL:0000034,9.35e-08,441;CL:0002321,9.36e-08,250;CL:0000192,4.19e-07,43;CL:0000514,4.19e-07,43;CL:0000680,8.65e-07,58;CL:0000056,8.65e-07,58;CL:0000355,8.65e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.20e-10!79;UBERON:0007798!2.20e-10!79;UBERON:0005256!3.63e-10!143;UBERON:0000055!9.67e-10!69;UBERON:0003914!1.23e-09!118;UBERON:0001981!3.30e-08!60;UBERON:0007500!3.30e-08!60;UBERON:0004537!3.30e-08!60;UBERON:0006965!3.30e-08!60;UBERON:0000914!4.13e-08!83;UBERON:0002329!4.13e-08!83;UBERON:0003077!4.13e-08!83;UBERON:0003059!4.13e-08!83;UBERON:0007282!4.13e-08!83;UBERON:0009618!4.13e-08!83;UBERON:0007285!4.13e-08!83;UBERON:0001009!5.58e-08!113;UBERON:0004535!1.09e-07!110;UBERON:0004290!1.32e-07!70;UBERON:0004872!1.46e-07!84;UBERON:0001637!2.87e-07!42;UBERON:0003509!2.87e-07!42;UBERON:0004572!2.87e-07!42;UBERON:0000477!3.29e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.08e-10,78;UBERON:0007798,2.08e-10,78;UBERON:0000055,1.19e-09,68;UBERON:0003914,2.87e-09,117;UBERON:0007503,6.21e-09,78;UBERON:0007500,4.36e-08,59;UBERON:0001981,4.36e-08,59;UBERON:0004537,4.36e-08,59;UBERON:0006965,4.36e-08,59;UBERON:0005256,4.45e-08,122;UBERON:0001009,8.23e-08,112;UBERON:0003104,1.12e-07,160;UBERON:0009142,1.12e-07,160;UBERON:0002199,1.18e-07,46;UBERON:0002416,1.18e-07,46;UBERON:0004535,1.34e-07,109;UBERON:0004872,2.14e-07,83;UBERON:0002329,5.30e-07,71;UBERON:0003059,5.30e-07,71;UBERON:0007282,5.30e-07,71;UBERON:0004290,5.30e-07,71;UBERON:0009618,5.30e-07,71;UBERON:0003077,5.82e-07,72;UBERON:0007285,5.82e-07,72;UBERON:0007524,5.97e-07,73;UBERON:0003102,6.91e-07,99 | |||
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| ||
|short_description=p5@CYB5R3 | |short_description=p5@CYB5R3 | ||
}} | }} |
Latest revision as of 00:29, 25 September 2015
Short description: | p5@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYB5R3_5end |
Coexpression cluster: | C2647_Adipocyte_Preadipocyte_tenocyte_Osteoblast_basal_Mesenchymal_Olfactory |
Association with transcript: | -65bp_to_AY421733_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | Q6TGM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.47e-14 | 76 |
mesodermal cell | 2.67e-11 | 121 |
somatic stem cell | 1.04e-08 | 433 |
fat cell | 1.86e-08 | 15 |
multi fate stem cell | 3.17e-08 | 427 |
stem cell | 9.35e-08 | 441 |
embryonic cell | 9.36e-08 | 250 |
smooth muscle cell | 4.19e-07 | 43 |
smooth muscle myoblast | 4.19e-07 | 43 |
muscle precursor cell | 8.65e-07 | 58 |
myoblast | 8.65e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.65e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.08e-10 | 78 |
vascular system | 2.08e-10 | 78 |
vessel | 1.19e-09 | 68 |
epithelial tube | 2.87e-09 | 117 |
epithelial vesicle | 6.21e-09 | 78 |
epithelial tube open at both ends | 4.36e-08 | 59 |
blood vessel | 4.36e-08 | 59 |
blood vasculature | 4.36e-08 | 59 |
vascular cord | 4.36e-08 | 59 |
trunk mesenchyme | 4.45e-08 | 122 |
circulatory system | 8.23e-08 | 112 |
mesenchyme | 1.12e-07 | 160 |
entire embryonic mesenchyme | 1.12e-07 | 160 |
integument | 1.18e-07 | 46 |
integumental system | 1.18e-07 | 46 |
cardiovascular system | 1.34e-07 | 109 |
splanchnic layer of lateral plate mesoderm | 2.14e-07 | 83 |
somite | 5.30e-07 | 71 |
presomitic mesoderm | 5.30e-07 | 71 |
presumptive segmental plate | 5.30e-07 | 71 |
dermomyotome | 5.30e-07 | 71 |
trunk paraxial mesoderm | 5.30e-07 | 71 |
paraxial mesoderm | 5.82e-07 | 72 |
presumptive paraxial mesoderm | 5.82e-07 | 72 |
dense mesenchyme tissue | 5.97e-07 | 73 |
surface structure | 6.91e-07 | 99 |