FFCP PHASE1:Hg19::chr13:80915252..80915274,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:80915252..80915274,-
|short_description=p1@SPRY2
|description=CAGE_peak_1_at_SPRY2_5end
|association_with_transcript=-166bp_to_ENST00000377104,NM_005842,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10253 | |EntrezGene=10253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11270 | |HGNC=11270 | ||
|TSSclassifier=strong | |||
|UniProt=O43597 | |UniProt=O43597 | ||
|association_with_transcript=-166bp_to_ENST00000377104,NM_005842,uc001vlj.2_5end | |||
|cluster_id=chr13:80915252..80915274,- | |||
|coexpression_cluster_id=C3386 | |||
|description=CAGE_peak_1_at_SPRY2_5end | |||
|id=chr13:80915252..80915274,- | |||
|ontology_enrichment_celltype=CL:0000055!6.50e-19!180;CL:0002321!4.67e-10!248;CL:0000220!1.47e-09!246;CL:0000393!3.42e-09!60;CL:0000211!3.42e-09!60;CL:0000183!1.91e-08!59;CL:0000680!2.06e-08!57;CL:0000056!2.06e-08!57;CL:0000355!2.06e-08!57;CL:0000359!3.00e-08!32;CL:0000187!4.40e-08!54;CL:0000222!1.04e-07!119;CL:0000192!2.20e-07!42;CL:0000514!2.20e-07!42;CL:0000147!4.93e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.26e-08;32!CL:0000147;5.02e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.85e-10,250;CL:0000393,1.78e-09,61;CL:0000211,1.78e-09,61;CL:0000680,1.09e-08,58;CL:0000056,1.09e-08,58;CL:0000355,1.09e-08,58;CL:0000187,2.33e-08,55;CL:0000359,2.88e-08,32;CL:0000222,5.80e-08,121;CL:0000192,1.16e-07,43;CL:0000514,1.16e-07,43;CL:0000147,4.78e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.21e-25!312;UBERON:0000483!5.32e-25!309;UBERON:0000475!9.80e-23!365;UBERON:0000025!7.60e-22!194;UBERON:0004111!1.10e-21!241;UBERON:0000481!4.88e-21!347;UBERON:0000477!2.21e-20!286;UBERON:0000468!5.34e-18!659;UBERON:0000467!3.09e-17!625;UBERON:0000480!7.14e-17!626;UBERON:0004121!8.48e-17!169;UBERON:0000922!4.57e-16!612;UBERON:0000924!2.85e-15!173;UBERON:0006601!2.85e-15!173;UBERON:0003075!1.19e-14!86;UBERON:0007284!1.19e-14!86;UBERON:0000914!2.34e-14!83;UBERON:0002329!2.34e-14!83;UBERON:0003077!2.34e-14!83;UBERON:0003059!2.34e-14!83;UBERON:0007282!2.34e-14!83;UBERON:0009618!2.34e-14!83;UBERON:0007285!2.34e-14!83;UBERON:0000033!2.47e-14!123;UBERON:0002050!5.52e-14!605;UBERON:0005423!5.52e-14!605;UBERON:0000923!6.38e-14!604;UBERON:0005291!6.38e-14!604;UBERON:0006598!6.38e-14!604;UBERON:0002532!6.38e-14!604;UBERON:0002049!1.09e-13!79;UBERON:0007798!1.09e-13!79;UBERON:0003914!1.16e-13!118;UBERON:0005256!1.19e-13!143;UBERON:0005743!1.84e-13!86;UBERON:0000073!8.88e-13!94;UBERON:0001016!8.88e-13!94;UBERON:0002346!1.24e-12!90;UBERON:0000153!1.27e-12!129;UBERON:0007811!1.27e-12!129;UBERON:0000055!4.39e-12!69;UBERON:0004290!4.69e-12!70;UBERON:0001017!7.41e-12!82;UBERON:0001637!1.02e-11!42;UBERON:0003509!1.02e-11!42;UBERON:0004572!1.02e-11!42;UBERON:0001049!1.51e-11!57;UBERON:0005068!1.51e-11!57;UBERON:0006241!1.51e-11!57;UBERON:0007135!1.51e-11!57;UBERON:0001981!3.54e-11!60;UBERON:0007500!3.54e-11!60;UBERON:0004537!3.54e-11!60;UBERON:0006965!3.54e-11!60;UBERON:0004872!5.06e-11!84;UBERON:0003056!5.35e-10!61;UBERON:0004573!7.90e-10!33;UBERON:0004571!7.90e-10!33;UBERON:0002616!8.76e-10!59;UBERON:0000486!2.08e-09!82;UBERON:0000955!5.39e-09!69;UBERON:0006238!5.39e-09!69;UBERON:0001134!6.64e-09!61;UBERON:0002036!6.64e-09!61;UBERON:0003082!6.64e-09!61;UBERON:0002100!8.14e-09!216;UBERON:0002385!1.09e-08!63;UBERON:0001015!1.09e-08!63;UBERON:0000383!1.09e-08!63;UBERON:0001009!1.69e-08!113;UBERON:0004535!1.69e-08!110;UBERON:0000064!3.57e-08!219;UBERON:0002020!1.11e-07!34;UBERON:0003528!1.11e-07!34;UBERON:0003104!2.16e-07!238;UBERON:0009142!2.16e-07!238;UBERON:0000062!2.82e-07!511;UBERON:0001893!3.08e-07!34;UBERON:0002791!3.87e-07!33;UBERON:0003080!4.63e-07!42;UBERON:0001869!9.37e-07!32;UBERON:0002780!9.93e-07!41;UBERON:0001890!9.93e-07!41;UBERON:0006240!9.93e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.44e-09;33!UBERON:0004571;4.44e-09;33!UBERON:0001637;1.73e-08;42!UBERON:0003509;1.73e-08;42!UBERON:0004572;1.73e-08;42!UBERON:0003528;6.93e-07;34!UBERON:0002020;6.93e-07;34!UBERON:0007500;7.01e-07;56!UBERON:0001981;7.01e-07;56!UBERON:0004537;7.01e-07;56 | |||
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| ||
|short_description=p1@SPRY2 | |||
}} | }} |
Latest revision as of 02:57, 18 September 2015
Short description: | p1@SPRY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRY2_5end |
Coexpression cluster: | C3386_gastric_Trabecular_Keratocytes_Neural_rhabdomyosarcoma_embryonic_Fibroblast |
Association with transcript: | -166bp_to_ENST00000377104, NM_005842, uc001vlj.2_5end |
EntrezGene: | SPRY2 |
HGNC: | 11270 |
UniProt: | O43597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.85e-10 | 250 |
electrically responsive cell | 1.78e-09 | 61 |
electrically active cell | 1.78e-09 | 61 |
muscle precursor cell | 1.09e-08 | 58 |
myoblast | 1.09e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-08 | 58 |
muscle cell | 2.33e-08 | 55 |
vascular associated smooth muscle cell | 2.88e-08 | 32 |
mesodermal cell | 5.80e-08 | 121 |
smooth muscle cell | 1.16e-07 | 43 |
smooth muscle myoblast | 1.16e-07 | 43 |
pigment cell | 4.78e-07 | 14 |