FFCP PHASE1:Hg19::chr22:35806354..35806377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4174 | |EntrezGene=4174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6948 | |HGNC=6948 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000464908_5end | |association_with_transcript=2bp_to_ENST00000464908_5end | ||
|cluster_id=chr22:35806354..35806377,+ | |||
|coexpression_cluster_id=C4095 | |||
|description=CAGE_peak_4_at_MCM5_5end | |description=CAGE_peak_4_at_MCM5_5end | ||
|id=chr22:35806354..35806377,+ | |id=chr22:35806354..35806377,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.22e-73!140;CL:0002087!1.20e-65!119;CL:0000037!8.93e-60!172;CL:0000566!8.93e-60!172;CL:0002031!8.77e-57!124;CL:0002032!9.49e-56!165;CL:0000837!9.49e-56!165;CL:0002057!2.01e-55!42;CL:0000988!7.55e-55!182;CL:0000860!5.62e-53!45;CL:0000766!5.10e-52!76;CL:0002194!5.25e-49!63;CL:0000576!5.25e-49!63;CL:0000040!5.25e-49!63;CL:0000559!5.25e-49!63;CL:0002009!6.51e-49!65;CL:0000557!2.56e-43!71;CL:0000839!2.09e-42!70;CL:0000763!4.32e-38!112;CL:0000049!4.32e-38!112;CL:0000945!2.16e-28!24;CL:0000826!2.16e-28!24;CL:0000236!1.04e-16!14;CL:0000134!4.52e-15!358;CL:0000542!5.03e-15!53;CL:0000051!5.03e-15!53;CL:0000838!2.41e-14!52;CL:0002320!2.84e-14!365;CL:0002393!4.99e-14!9;CL:0002397!4.99e-14!9;CL:0000219!1.67e-11!390;CL:0000451!4.11e-09!10;CL:0000094!5.49e-09!8;CL:0000048!2.56e-08!430;CL:0000723!6.99e-08!436;CL:0000034!1.03e-07!444;CL:0000990!4.62e-07!8 | |ontology_enrichment_celltype=CL:0000738!3.22e-73!140;CL:0002087!1.20e-65!119;CL:0000037!8.93e-60!172;CL:0000566!8.93e-60!172;CL:0002031!8.77e-57!124;CL:0002032!9.49e-56!165;CL:0000837!9.49e-56!165;CL:0002057!2.01e-55!42;CL:0000988!7.55e-55!182;CL:0000860!5.62e-53!45;CL:0000766!5.10e-52!76;CL:0002194!5.25e-49!63;CL:0000576!5.25e-49!63;CL:0000040!5.25e-49!63;CL:0000559!5.25e-49!63;CL:0002009!6.51e-49!65;CL:0000557!2.56e-43!71;CL:0000839!2.09e-42!70;CL:0000763!4.32e-38!112;CL:0000049!4.32e-38!112;CL:0000945!2.16e-28!24;CL:0000826!2.16e-28!24;CL:0000236!1.04e-16!14;CL:0000134!4.52e-15!358;CL:0000542!5.03e-15!53;CL:0000051!5.03e-15!53;CL:0000838!2.41e-14!52;CL:0002320!2.84e-14!365;CL:0002393!4.99e-14!9;CL:0002397!4.99e-14!9;CL:0000219!1.67e-11!390;CL:0000451!4.11e-09!10;CL:0000094!5.49e-09!8;CL:0000048!2.56e-08!430;CL:0000723!6.99e-08!436;CL:0000034!1.03e-07!444;CL:0000990!4.62e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.57e-62;33!CL:0002057;4.57e-62;33!CL:0000473;4.08e-45;39!CL:0000234;4.08e-45;39!CL:0000576;2.77e-44;48!CL:0000766;6.21e-27;69!CL:0000945;8.10e-23;24!CL:0002087;1.36e-20;104!CL:0000236;1.31e-19;13!CL:0000738;4.00e-17;136!CL:0000763;7.09e-15;100!CL:0002393;2.09e-11;6!CL:0002397;2.09e-11;6!CL:0000875;4.41e-10;3!CL:0002396;4.41e-10;3!CL:0000988;1.06e-09;177!CL:0000094;1.72e-08;8!CL:0000767;2.13e-08;3!CL:0000219;2.17e-08;193!CL:0000840;2.60e-07;5!CL:0000771;4.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.95e-87,42;CL:0002057,6.95e-87,42;CL:0000473,9.30e-79,48;CL:0000234,9.30e-79,48;CL:0000766,2.50e-76,72;CL:0002194,3.41e-75,59;CL:0000576,3.41e-75,59;CL:0000040,3.41e-75,59;CL:0000559,3.41e-75,59;CL:0002009,2.20e-72,61;CL:0000738,7.09e-70,136;CL:0002087,3.82e-68,115;CL:0000839,4.30e-66,66;CL:0000557,6.03e-65,67;CL:0002031,9.91e-65,120;CL:0002032,9.13e-55,161;CL:0000837,9.13e-55,161;CL:0000037,8.88e-54,168;CL:0000988,2.72e-50,177;CL:0000763,7.11e-47,108;CL:0000049,7.11e-47,108;CL:0000945,4.01e-23,24;CL:0000826,4.01e-23,24;CL:0002393,1.07e-19,9;CL:0002397,1.07e-19,9;CL:0000236,1.82e-18,14;CL:0000134,1.18e-17,354;CL:0002320,5.07e-17,361;CL:0000219,8.59e-15,386;CL:0000048,4.48e-12,427;CL:0000723,1.06e-11,433;CL:0000034,3.22e-11,441;CL:0000875,3.95e-10,3;CL:0002396,3.95e-10,3;CL:0000838,1.21e-08,52;CL:0000094,1.53e-08,8;CL:0000767,1.93e-08,3;CL:0000542,2.04e-08,53;CL:0000051,2.04e-08,53;CL:0000840,1.84e-07,5;CL:0001029,1.84e-07,5;CL:0000771,3.71e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-60;42!CL:0000049;2.33e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.63e-49!102;UBERON:0003061!1.63e-49!102;UBERON:0002193!2.82e-46!112;UBERON:0002371!3.49e-38!80;UBERON:0001474!2.61e-34!86;UBERON:0002405!1.93e-29!115;UBERON:0004765!7.69e-28!101;UBERON:0001434!7.69e-28!101;UBERON:0002384!1.00e-13!375;UBERON:0003081!2.81e-13!216;UBERON:0002204!3.70e-11!167;UBERON:0000178!7.41e-10!15;UBERON:0000179!7.41e-10!15;UBERON:0000463!7.41e-10!15;UBERON:0007023!7.21e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.44e-60,98;UBERON:0003061,3.44e-60,98;UBERON:0002371,5.74e-56,76;UBERON:0002193,1.91e-53,108;UBERON:0001474,4.57e-51,82;UBERON:0002405,3.42e-48,93;UBERON:0004765,1.54e-45,90;UBERON:0001434,7.21e-40,100;UBERON:0003081,1.45e-23,203;UBERON:0002204,2.12e-19,167;UBERON:0002384,3.71e-16,371;UBERON:0000926,1.07e-10,315;UBERON:0004120,1.07e-10,315;UBERON:0006603,1.07e-10,315 | |||
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|short_description=p4@MCM5 | |short_description=p4@MCM5 | ||
}} | }} |
Latest revision as of 00:04, 20 September 2015
Short description: | p4@MCM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MCM5_5end |
Coexpression cluster: | C4095_CD14CD16_B_Eosinophils_CD14_Basophils_Neutrophils_CD19 |
Association with transcript: | 2bp_to_ENST00000464908_5end |
EntrezGene: | MCM5 |
HGNC: | 6948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.44e-60 | 98 |
blood island | 3.44e-60 | 98 |
bone marrow | 5.74e-56 | 76 |
hemolymphoid system | 1.91e-53 | 108 |
bone element | 4.57e-51 | 82 |
immune system | 3.42e-48 | 93 |
skeletal element | 1.54e-45 | 90 |
skeletal system | 7.21e-40 | 100 |
lateral plate mesoderm | 1.45e-23 | 203 |
musculoskeletal system | 2.12e-19 | 167 |
connective tissue | 3.71e-16 | 371 |
mesoderm | 1.07e-10 | 315 |
mesoderm-derived structure | 1.07e-10 | 315 |
presumptive mesoderm | 1.07e-10 | 315 |