FFCP PHASE1:Hg19::chr13:76210721..76210732,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:76210721..76210732,+
|short_description=p38@LMO7
|description=CAGE_peak_38_at_LMO7_5end
|association_with_transcript=262bp_to_ENST00000377499,uc001vjt.1_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMP7 | |UniProt=E9PMP7 | ||
|association_with_transcript=262bp_to_ENST00000377499,uc001vjt.1_5end | |||
|cluster_id=chr13:76210721..76210732,+ | |||
|coexpression_cluster_id=C1189 | |||
|description=CAGE_peak_38_at_LMO7_5end | |||
|id=chr13:76210721..76210732,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.22e-23!180;CL:0000057!2.46e-19!75;CL:0002620!2.06e-10!23;CL:0000048!1.83e-08!430;CL:0000723!2.76e-08!436;CL:0000219!4.87e-08!390;CL:0000034!1.30e-07!444;CL:0002556!3.11e-07!6;CL:0002320!6.08e-07!365;CL:0002371!8.68e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000138;4.40e-14;6!CL:0002580;2.54e-13;3!CL:0000222;8.93e-11;1!CL:0002568;2.38e-10;1!CL:1000306;5.96e-10;4!CL:0002547;5.96e-10;4!CL:0000153;1.43e-09;9!CL:0000447;1.43e-09;9!CL:0002334;1.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,6.17e-14,6;CL:0000138,6.17e-14,6;CL:0002580,2.18e-13,3;CL:0000057,1.55e-10,76;CL:0002568,2.50e-10,1;CL:1000306,7.83e-10,4;CL:0002547,7.83e-10,4;CL:0000153,1.78e-09,9;CL:0000447,1.78e-09,9;CL:0002334,1.52e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!3.11e-07!6;UBERON:0003672!3.11e-07!6;UBERON:0002384!7.78e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.96e-10;4!UBERON:0000415;5.96e-10;4!UBERON:0007240;5.96e-10;4!UBERON:0005742;5.96e-10;4!UBERON:0005734;5.96e-10;4!UBERON:0004664;5.96e-10;4!UBERON:0004663;5.96e-10;4!UBERON:0000310;8.04e-09;10!UBERON:0001443;4.61e-08;11!UBERON:0003688;3.44e-07;6!UBERON:0002358;3.44e-07;6!UBERON:0003684;3.44e-07;6!UBERON:0001178;3.44e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.83e-10,4;UBERON:0007240,7.83e-10,4;UBERON:0005742,7.83e-10,4;UBERON:0005734,7.83e-10,4;UBERON:0004664,7.83e-10,4;UBERON:0004663,7.83e-10,4;UBERON:0000310,7.84e-09,10;UBERON:0001443,4.51e-08,11;UBERON:0003688,3.77e-07,6;UBERON:0002358,3.77e-07,6;UBERON:0003684,3.77e-07,6;UBERON:0001178,3.77e-07,6 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.140954404095971,2.00146596706261,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.12786256184353,1.80719576192283,1.00267582127178,1.01392563272577,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.05927344650575,0.860509862246441,1.06400514659507,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0.831192346452549,0.438977620880838,1.5324389789951,0.150238058906597,0,1.25572744982203,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,0.772921620136887,0.37223371266318,1.85653965465393,0.487185025805993,1.51460264546469,0.552299391853796,0.969876340912871,2.13005755509969,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,1.16344544182,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.579125226670317,0.821905290201534,0.716243852959582,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0.157702415033935,0.468565659970853,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0,1.48864684691266,3.83654933220156,0.561320188866147,0.896974044789907,2.04682899626681,0.965123526861645,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,1.59691809095107,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.848432591722276,0,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0,0,0.573645408816206,0.491245205065606,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.641183153813036,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0.271808412147228,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0.757612021100357,0,0.889811221596536,0,0.604923695052956,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0.414706207840855,0.53168342911599,0,0,0.761610424337591,0,0.181848659202559,0.214821114084977,0,1.19428766609585,0,0,0.336749488765919,2.52369796457302,0,0.428883182749851,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.813792356631477,0,0,0 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|phase1_expression=1.09007027562334,0.428201047781966,0.140954404095971,2.00146596706261,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.12786256184353,1.80719576192283,1.00267582127178,1.01392563272577,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.05927344650575,0.860509862246441,1.06400514659507,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0.831192346452549,0.438977620880838,1.5324389789951,0.150238058906597,0,1.25572744982203,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,0.772921620136887,0.37223371266318,1.85653965465393,0.487185025805993,1.51460264546469,0.552299391853796,0.969876340912871,2.13005755509969,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,1.16344544182,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.579125226670317,0.821905290201534,0.716243852959582,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0.157702415033935,0.468565659970853,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0,1.48864684691266,3.83654933220156,0.561320188866147,0.896974044789907,2.04682899626681,0.965123526861645,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,1.59691809095107,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.848432591722276,0,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0,0,0.573645408816206,0.491245205065606,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.641183153813036,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0.271808412147228,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0.757612021100357,0,0.889811221596536,0,0.604923695052956,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0.414706207840855,0.53168342911599,0,0,0.761610424337591,0,0.181848659202559,0.214821114084977,0,1.19428766609585,0,0,0.336749488765919,2.52369796457302,0,0.428883182749851,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.813792356631477,0,0,0 | ||
|short_description=p38@LMO7 | |||
}} | }} |
Latest revision as of 00:00, 18 September 2015
Short description: | p38@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_LMO7_5end |
Coexpression cluster: | C1189_Preadipocyte_Fibroblast_Ewing_mesodermal_Adipocyte_Smooth_osteoclastoma |
Association with transcript: | 262bp_to_ENST00000377499, uc001vjt.1_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PMP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 6.17e-14 | 6 |
chondrocyte | 6.17e-14 | 6 |
preadipocyte of the breast | 2.18e-13 | 3 |
fibroblast | 1.55e-10 | 76 |
mesenchymal stem cell of Wharton's jelly | 2.50e-10 | 1 |
fibroblast of tunica adventitia of artery | 7.83e-10 | 4 |
fibroblast of the aortic adventitia | 7.83e-10 | 4 |
GAG secreting cell | 1.78e-09 | 9 |
carbohydrate secreting cell | 1.78e-09 | 9 |
preadipocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.83e-10 | 4 |
tunica adventitia of artery | 7.83e-10 | 4 |
adventitia | 7.83e-10 | 4 |
tunica adventitia of blood vessel | 7.83e-10 | 4 |
aorta tunica adventitia | 7.83e-10 | 4 |
aorta wall | 7.83e-10 | 4 |
breast | 7.84e-09 | 10 |
chest | 4.51e-08 | 11 |
omentum | 3.77e-07 | 6 |
peritoneum | 3.77e-07 | 6 |
abdominal cavity | 3.77e-07 | 6 |
visceral peritoneum | 3.77e-07 | 6 |