FFCP PHASE1:Hg19::chr22:31742303..31742350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23598 | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |HGNC=13071 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBE1 | |UniProt=Q9HBE1 | ||
|association_with_transcript=-54bp_to_NM_014323,NM_032050,NM_032051,NM_032052,uc003akp.2,uc003akq.2,uc003akr.2,uc003aks.2_5end | |association_with_transcript=-54bp_to_NM_014323,NM_032050,NM_032051,NM_032052,uc003akp.2,uc003akq.2,uc003akr.2,uc003aks.2_5end | ||
|cluster_id=chr22:31742303..31742350,- | |||
|description=CAGE_peak_1_at_PATZ1_5end | |description=CAGE_peak_1_at_PATZ1_5end | ||
|id=chr22:31742303..31742350,- | |id=chr22:31742303..31742350,- | ||
|ontology_enrichment_celltype=CL:0000838!3.78e-09!52;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53;CL:0000791!9.76e-08!18;CL:0000789!9.76e-08!18;CL:0002420!9.76e-08!18;CL:0002419!9.76e-08!18;CL:0000790!9.76e-08!18 | |ontology_enrichment_celltype=CL:0000838!3.78e-09!52;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53;CL:0000791!9.76e-08!18;CL:0000789!9.76e-08!18;CL:0002420!9.76e-08!18;CL:0002419!9.76e-08!18;CL:0000790!9.76e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.09e-08;18!CL:0000789;9.09e-08;18!CL:0002419;9.09e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.78e-09,52;CL:0000542,1.18e-08,53;CL:0000051,1.18e-08,53;CL:0000791,9.76e-08,18;CL:0000789,9.76e-08,18;CL:0002420,9.76e-08,18;CL:0002419,9.76e-08,18;CL:0000790,9.76e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;9.09e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-08!115;UBERON:0002346!3.32e-07!90;UBERON:0000073!4.14e-07!94;UBERON:0001016!4.14e-07!94;UBERON:0005743!6.99e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-08,86;UBERON:0007023,4.50e-08,114;UBERON:0003075,1.63e-07,82;UBERON:0007284,1.63e-07,82 | |||
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| ||
|short_description=p1@PATZ1 | |short_description=p1@PATZ1 | ||
}} | }} |
Latest revision as of 20:34, 19 September 2015
Short description: | p1@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PATZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_NM_014323, NM_032050, NM_032051, NM_032052, uc003akp.2, uc003akq.2, uc003akr.2, uc003aks.2_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | Q9HBE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.78e-09 | 52 |
lymphocyte | 1.18e-08 | 53 |
common lymphoid progenitor | 1.18e-08 | 53 |
mature alpha-beta T cell | 9.76e-08 | 18 |
alpha-beta T cell | 9.76e-08 | 18 |
immature T cell | 9.76e-08 | 18 |
mature T cell | 9.76e-08 | 18 |
immature alpha-beta T cell | 9.76e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.13e-08 | 86 |
adult organism | 4.50e-08 | 114 |
neural plate | 1.63e-07 | 82 |
presumptive neural plate | 1.63e-07 | 82 |