FFCP PHASE1:Hg19::chr7:153634554..153634556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:153634554..153634556,+ | |||
|coexpression_cluster_id=C586 | |||
|description=CAGE_peak_at_chr7:153634554..153634556,+ | |description=CAGE_peak_at_chr7:153634554..153634556,+ | ||
|id=chr7:153634554..153634556,+ | |id=chr7:153634554..153634556,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.27e-34;3!UBERON:0006238;2.37e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.12e-38!57;UBERON:0005068!5.12e-38!57;UBERON:0006241!5.12e-38!57;UBERON:0007135!5.12e-38!57;UBERON:0002616!5.83e-33!59;UBERON:0000955!2.49e-30!69;UBERON:0006238!2.49e-30!69;UBERON:0007023!4.67e-30!115;UBERON:0001017!1.26e-27!82;UBERON:0005743!3.74e-26!86;UBERON:0000073!9.04e-26!94;UBERON:0001016!9.04e-26!94;UBERON:0002346!5.14e-25!90;UBERON:0002298!8.05e-25!8;UBERON:0002020!4.48e-24!34;UBERON:0003528!4.48e-24!34;UBERON:0003075!7.86e-24!86;UBERON:0007284!7.86e-24!86;UBERON:0003076!4.68e-23!15;UBERON:0003057!4.68e-23!15;UBERON:0004733!2.24e-22!12;UBERON:0002028!2.24e-22!12;UBERON:0007277!2.24e-22!12;UBERON:0004732!1.37e-20!13;UBERON:0002780!1.01e-19!41;UBERON:0001890!1.01e-19!41;UBERON:0006240!1.01e-19!41;UBERON:0003080!3.33e-19!42;UBERON:0002791!1.01e-17!33;UBERON:0006331!2.26e-17!3;UBERON:0000988!3.16e-17!3;UBERON:0001893!3.73e-17!34;UBERON:0002680!9.72e-16!9;UBERON:0001895!9.72e-16!9;UBERON:0010092!9.72e-16!9;UBERON:0002308!1.07e-15!9;UBERON:0000125!1.07e-15!9;UBERON:0000033!2.88e-15!123;UBERON:0001869!5.51e-15!32;UBERON:0000153!2.32e-14!129;UBERON:0007811!2.32e-14!129;UBERON:0002619!5.01e-14!22;UBERON:0000924!2.63e-13!173;UBERON:0006601!2.63e-13!173;UBERON:0003056!1.63e-12!61;UBERON:0004121!2.18e-12!169;UBERON:0000956!2.83e-12!25;UBERON:0000203!2.83e-12!25;UBERON:0001950!7.37e-12!20;UBERON:0002148!8.11e-12!2;UBERON:0009662!8.11e-12!2;UBERON:0001871!4.41e-11!7;UBERON:0002420!1.75e-10!9;UBERON:0007245!1.75e-10!9;UBERON:0010009!1.75e-10!9;UBERON:0010011!1.75e-10!9;UBERON:0000454!1.75e-10!9;UBERON:0000025!3.60e-09!194;UBERON:0001896!1.86e-08!3;UBERON:0005290!1.86e-08!3;UBERON:0010096!1.86e-08!3;UBERON:0002771!2.70e-08!3;UBERON:0009663!3.89e-08!7;UBERON:0004111!2.43e-07!241;UBERON:0002038!2.82e-07!1;UBERON:0009661!2.82e-07!1;UBERON:0006834!4.25e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.67e-18;6!UBERON:0002680;2.19e-12;9!UBERON:0001895;2.19e-12;9!UBERON:0004733;1.22e-09;12!UBERON:0002028;1.22e-09;12!UBERON:0004732;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr7:153634554..153634556,+ | |short_description=p@chr7:153634554..153634556,+ | ||
}} | }} |
Latest revision as of 07:48, 31 July 2015
Short description: | p@chr7:153634554..153634556, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:153634554..153634556, + |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |