FFCP PHASE1:Hg19::chr22:23055620..23055631,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=163bp_to_DQ234400_5end | |association_with_transcript=163bp_to_DQ234400_5end | ||
|cluster_id=chr22:23055620..23055631,+ | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_1_at_DQ234400_5end | |description=CAGE_peak_1_at_DQ234400_5end | ||
|id=chr22:23055620..23055631,+ | |id=chr22:23055620..23055631,+ | ||
|ontology_enrichment_celltype=CL:0000236!2.19e-23!14;CL:0000945!4.99e-22!24;CL:0000826!4.99e-22!24;CL:0000838!2.22e-09!52;CL:0000542!3.55e-09!53;CL:0000051!3.55e-09!53 | |ontology_enrichment_celltype=CL:0000236!2.19e-23!14;CL:0000945!4.99e-22!24;CL:0000826!4.99e-22!24;CL:0000838!2.22e-09!52;CL:0000542!3.55e-09!53;CL:0000051!3.55e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.16e-34;24!CL:0000236;1.97e-23;13!CL:0000542;2.99e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.20e-34,24;CL:0000826,1.20e-34,24;CL:0000236,8.27e-22,14;CL:0000838,2.52e-16,52;CL:0000542,5.00e-16,53;CL:0000051,5.00e-16,53;CL:0002087,1.48e-07,115;CL:0002031,2.95e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.99e-10;53 | |||
|ontology_enrichment_disease=DOID:630!1.65e-08!1;DOID:0050177!1.65e-08!1;DOID:0050427!1.65e-08!1;DOID:4960!1.77e-08!1;DOID:0070004!1.77e-08!1 | |ontology_enrichment_disease=DOID:630!1.65e-08!1;DOID:0050177!1.65e-08!1;DOID:0050427!1.65e-08!1;DOID:4960!1.77e-08!1;DOID:0070004!1.77e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:630;1.84e-34;1!DOID:0050177;1.84e-34;1!DOID:0050427;1.84e-34;1!DOID:4960;2.58e-34;1!DOID:0070004;2.58e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.84e-34,1;DOID:0050177,1.84e-34,1;DOID:0050427,1.84e-34,1;DOID:4960,2.58e-34,1;DOID:0070004,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.82e-17!115;UBERON:0001042!1.24e-10!10;UBERON:0009145!1.24e-10!10;UBERON:0006562!1.11e-09!11;UBERON:0004177!7.29e-09!7;UBERON:0000029!2.04e-08!1;UBERON:0001154!2.90e-08!1;UBERON:0001153!2.90e-08!1;UBERON:0001736!3.83e-08!1;UBERON:0006298!3.83e-08!1;UBERON:0000998!4.71e-08!1;UBERON:0006868!4.71e-08!1;UBERON:0002372!5.40e-08!1;UBERON:0001961!5.40e-08!1;UBERON:0001744!5.40e-08!1;UBERON:0001735!5.40e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0001155!2.17e-07!9;UBERON:0002370!2.51e-07!4;UBERON:0005058!2.51e-07!4;UBERON:0009113!2.51e-07!4;UBERON:0003295!2.51e-07!4;UBERON:0005562!2.51e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;5.97e-34;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.05e-34,1 | |||
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|short_description=p1@DQ234400 | |short_description=p1@DQ234400 | ||
}} | }} |
Latest revision as of 19:25, 28 July 2015
Short description: | p1@DQ234400 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DQ234400_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 163bp_to_DQ234400_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.20e-34 | 24 |
pro-B cell | 1.20e-34 | 24 |
B cell | 8.27e-22 | 14 |
lymphoid lineage restricted progenitor cell | 2.52e-16 | 52 |
lymphocyte | 5.00e-16 | 53 |
common lymphoid progenitor | 5.00e-16 | 53 |
nongranular leukocyte | 1.48e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.95e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.05e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.84e-34 | 1 |
monogenic disease | 1.84e-34 | 1 |
xeroderma pigmentosum | 1.84e-34 | 1 |
bone marrow cancer | 2.58e-34 | 1 |
myeloma | 2.58e-34 | 1 |