FFCP PHASE1:Hg19::chr22:21387127..21387141,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6545 | |EntrezGene=6545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11062 | |HGNC=11062 | ||
|TSSclassifier=strong | |||
|UniProt=C9JM63 | |UniProt=C9JM63 | ||
|association_with_transcript=0bp_to_ENST00000426145_5end | |association_with_transcript=0bp_to_ENST00000426145_5end | ||
|cluster_id=chr22:21387127..21387141,- | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_3_at_SLC7A4_5end | |description=CAGE_peak_3_at_SLC7A4_5end | ||
|id=chr22:21387127..21387141,- | |id=chr22:21387127..21387141,- | ||
|ontology_enrichment_celltype=CL:0000039!2.97e-12!7;CL:0000586!2.97e-12!7;CL:0000325!3.41e-10!39;CL:0002566!6.91e-10!1;CL:0000136!1.42e-09!15;CL:0000148!2.53e-08!10;CL:0000541!2.53e-08!10 | |ontology_enrichment_celltype=CL:0000039!2.97e-12!7;CL:0000586!2.97e-12!7;CL:0000325!3.41e-10!39;CL:0002566!6.91e-10!1;CL:0000136!1.42e-09!15;CL:0000148!2.53e-08!10;CL:0000541!2.53e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.61e-43;7!CL:0000586;5.61e-43;7!CL:0000083;1.27e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.22e-43,7;CL:0000586,5.22e-43,7;CL:0000083,1.32e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.05e-34;1 | |||
|ontology_enrichment_disease=DOID:1799!1.98e-10!1;DOID:10165!1.98e-10!1;DOID:1798!1.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.05e-34;1!DOID:10165;3.05e-34;1!DOID:1798;3.05e-34;1!DOID:3095;2.67e-14;22!DOID:2994;2.67e-14;22!DOID:1793;1.27e-09;4!DOID:170;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.61e-34,1;DOID:10165,3.61e-34,1;DOID:1798,3.61e-34,1;DOID:3095,2.61e-14,22;DOID:2994,2.61e-14,22;DOID:1793,1.32e-09,4;DOID:170,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006122!3.40e-10!1;UBERON:0002298!3.61e-10!8 | |ontology_enrichment_uberon=UBERON:0006122!3.40e-10!1;UBERON:0002298!3.61e-10!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.44e-09,4;UBERON:0004340,1.44e-09,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.411309970813294,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1528195219403,2.78248697670294,7.38802129069655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,1.0027595760908,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.411309970813294,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1528195219403,2.78248697670294,7.38802129069655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,1.0027595760908,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@SLC7A4 | |short_description=p3@SLC7A4 | ||
}} | }} |
Latest revision as of 06:02, 19 September 2015
Short description: | p3@SLC7A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC7A4_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000426145_5end |
EntrezGene: | SLC7A4 |
HGNC: | 11062 |
UniProt: | C9JM63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.22e-43 | 7 |
germ cell | 5.22e-43 | 7 |
epithelial cell of pancreas | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.61e-34 | 1 |
endocrine pancreas cancer | 3.61e-34 | 1 |
pancreatic endocrine carcinoma | 3.61e-34 | 1 |
germ cell and embryonal cancer | 2.61e-14 | 22 |
germ cell cancer | 2.61e-14 | 22 |
pancreatic cancer | 1.32e-09 | 4 |
endocrine gland cancer | 8.02e-07 | 6 |