FFCP PHASE1:Hg19::chr7:119913908..119913917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3751 | |EntrezGene=3751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6238 | |HGNC=6238 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZV8,A4D0V9 | |UniProt=Q9NZV8,A4D0V9 | ||
|association_with_transcript=186bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | |association_with_transcript=186bp_to_ENST00000331113,NM_012281,uc003vjj.1_5end | ||
|cluster_id=chr7:119913908..119913917,+ | |||
|coexpression_cluster_id=C710 | |||
|description=CAGE_peak_13_at_KCND2_5end | |description=CAGE_peak_13_at_KCND2_5end | ||
|id=chr7:119913908..119913917,+ | |id=chr7:119913908..119913917,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.47e-11!2 | |ontology_enrichment_celltype=CL:0000242!1.47e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;7.14e-26;2!CL:0000242;7.14e-26;2!CL:0000312;3.26e-11;5!CL:0000240;1.44e-09;6!CL:0000311;1.44e-09;6!CL:0000079;1.44e-09;6!CL:0000237;1.44e-09;6!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.18e-26,2;CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.40e-147;3!CL:0000357;1.44e-09;6!CL:0000114;1.44e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;3.31e-74;6!UBERON:0002680;6.62e-50;9!UBERON:0001895;6.62e-50;9!UBERON:0004733;9.76e-38;12!UBERON:0002028;9.76e-38;12!UBERON:0004732;6.32e-35;13!UBERON:0000073;8.01e-07;53!UBERON:0002616;8.01e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0010371,2.22e-08,104;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
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|short_description=p13@KCND2 | |short_description=p13@KCND2 | ||
}} | }} |
Latest revision as of 21:08, 15 September 2015
Short description: | p13@KCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KCND2_5end |
Coexpression cluster: | C710_anaplastic_cerebellum_xeroderma_B_carcinoid_merkel_occipital |
Association with transcript: | 186bp_to_ENST00000331113, NM_012281, uc003vjj.1_5end |
EntrezGene: | KCND2 |
HGNC: | 6238 |
UniProt: | Q9NZV8A4D0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.18e-26 | 2 |
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
ecto-epithelium | 2.22e-08 | 104 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |