FFCP PHASE1:Hg19::chr13:46733819..46733832,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:46733819..46733832,-
|short_description=p15@LCP1
|description=CAGE_peak_15_at_LCP1_5end
|association_with_transcript=-22bp_to_CU679665,DQ892935,DQ896184_5...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_CU679665,DQ892935,DQ896184_5end | |||
|cluster_id=chr13:46733819..46733832,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_15_at_LCP1_5end | |||
|id=chr13:46733819..46733832,- | |||
|ontology_enrichment_celltype=CL:0000037!4.08e-80!172;CL:0000566!4.08e-80!172;CL:0000988!2.05e-76!182;CL:0002032!8.81e-76!165;CL:0000837!8.81e-76!165;CL:0000738!4.43e-73!140;CL:0002087!4.25e-60!119;CL:0002031!2.49e-57!124;CL:0000763!1.08e-46!112;CL:0000049!1.08e-46!112;CL:0000766!1.03e-35!76;CL:0002009!2.37e-34!65;CL:0002194!2.49e-32!63;CL:0000576!2.49e-32!63;CL:0000040!2.49e-32!63;CL:0000559!2.49e-32!63;CL:0000557!3.83e-31!71;CL:0002057!5.48e-31!42;CL:0000839!7.29e-30!70;CL:0000860!5.25e-28!45;CL:0000542!1.87e-24!53;CL:0000051!1.87e-24!53;CL:0000838!1.79e-23!52;CL:0000134!1.58e-21!358;CL:0002320!2.10e-20!365;CL:0000219!5.06e-17!390;CL:0000084!2.20e-13!25;CL:0000827!2.20e-13!25;CL:0000451!2.93e-13!10;CL:0000034!3.57e-12!444;CL:0000048!5.55e-12!430;CL:0000723!9.60e-12!436;CL:0000990!2.05e-11!8;CL:0000945!1.97e-09!24;CL:0000826!1.97e-09!24;CL:0000840!1.92e-08!5;CL:0001029!1.92e-08!5;CL:0000791!1.04e-07!18;CL:0000789!1.04e-07!18;CL:0002420!1.04e-07!18;CL:0002419!1.04e-07!18;CL:0000790!1.04e-07!18;CL:0000094!3.20e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.09e-20;39!CL:0000234;6.09e-20;39!CL:0000860;2.28e-16;33!CL:0002057;2.28e-16;33!CL:0000766;9.97e-16;69!CL:0000840;3.06e-15;5!CL:0000451;3.09e-15;10!CL:0000990;4.55e-14;8!CL:0000775;1.37e-12;3!CL:0000738;2.14e-12;136!CL:0000576;5.64e-12;48!CL:0000763;1.00e-10;100!CL:0000235;4.91e-10;6!CL:0000988;8.37e-09;177!CL:0002087;1.83e-08;104!CL:0000094;4.36e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.81e-48,136;CL:0000037,3.12e-47,168;CL:0000988,2.76e-44,177;CL:0002032,3.61e-43,161;CL:0000837,3.61e-43,161;CL:0002087,4.42e-38,115;CL:0000766,5.03e-37,72;CL:0000763,4.51e-36,108;CL:0000049,4.51e-36,108;CL:0002009,3.48e-35,61;CL:0002031,4.14e-34,120;CL:0002194,1.46e-33,59;CL:0000576,1.46e-33,59;CL:0000040,1.46e-33,59;CL:0000559,1.46e-33,59;CL:0000557,1.83e-31,67;CL:0000473,3.08e-30,48;CL:0000234,3.08e-30,48;CL:0000839,2.36e-29,66;CL:0000860,9.07e-23,42;CL:0002057,9.07e-23,42;CL:0000134,1.23e-16,354;CL:0002320,4.28e-16,361;CL:0000840,2.83e-15,5;CL:0001029,2.83e-15,5;CL:0000451,3.98e-15,10;CL:0000219,3.41e-14,386;CL:0000990,4.39e-14,8;CL:0000775,1.61e-12,3;CL:0000048,7.21e-12,427;CL:0000723,1.51e-11,433;CL:0000034,3.92e-11,441;CL:0000235,5.19e-10,6;CL:0000094,4.63e-08,8;CL:0000542,1.88e-07,53;CL:0000051,1.88e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-15;42!CL:0000049;1.92e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!4.44e-17!51;DOID:0060083!4.44e-17!51;DOID:1240!8.85e-11!39;DOID:0060058!4.98e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.08e-07,51;DOID:0060083,2.08e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.16e-35!102;UBERON:0003061!8.16e-35!102;UBERON:0002193!7.83e-32!112;UBERON:0002371!5.30e-27!80;UBERON:0001474!6.91e-24!86;UBERON:0002405!1.71e-20!115;UBERON:0002384!5.79e-20!375;UBERON:0004765!1.20e-18!101;UBERON:0001434!1.20e-18!101;UBERON:0003081!1.15e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.65e-27,76;UBERON:0002390,5.79e-25,98;UBERON:0003061,5.79e-25,98;UBERON:0001474,1.59e-24,82;UBERON:0002405,1.00e-22,93;UBERON:0002193,5.57e-22,108;UBERON:0004765,9.12e-22,90;UBERON:0001434,6.14e-19,100;UBERON:0002384,2.33e-15,371;UBERON:0002204,8.37e-09,167;UBERON:0003081,2.12e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,2.05251473624864,2.04648031415566,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.995184627411951,0,0.553995408531877,1.40381113229099,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0.755751887377619,0.242584061187816,0.929716147622738,1.23350366406548,0.929119112685311,1.43846196161075,1.5369642391746,0.709446689665756,0.689491361473237,1.93645405075148,1.35426486594342,1.88242339542605,0.272906150057846,0.449446968890169,2.75475503133812,0,0.639337125799041,0.659702600373432,0.997318288108159,0.426224750532694,3.19230162491442,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,0.217188844705117,3.02699751316684,0,1.89877432464531,1.05627643155971,1.06302149982522,0,0.44931452458598,1.20141514273205,0.16072558669708,0,1.19350006319454,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,2.35806457649499,0.411202997999018,0.167186495390678,0,0,0,0.668462741311041,0.294605907474837,0.443067789167242,0,0.512365278902701,0.650296737799391,1.15106533222573,0.552700035571697,0.289803085735052,0.296573126324121,0,1.04535523804977,0.566546713487831,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,0,2.40696176205157,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27183175558278,1.56716763569341,2.52620124985844,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,2.6487785964879,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,2.10603838625314,0.891786973732369,0,0,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0,1.79336230389644,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0,0,8.98808428736619,38.8909896965232,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.490080431962063,1.30062222588003,0,0.355709216742071,0.797131363644112,0.997896857164083,0.5745161103971,1.05836791361941,0,0.561594356226918,0.456469358066384,0.47003968731907,0,0.169291777801603,0.481764225311099,1.41259795033733,0,1.37402137902306,0,0,0,0.976940477010201,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,6.13159789174419,0,0.498635045700469,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.313265848516366,0.067401132980677,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18542664892098,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.930053882193542,1.30852315404675,1.96565909307848,0,0,1.79988656269437,0.213383459388282,0.688859918643263,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0,0.599646935549574,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.203977659483963,0,0.275684698604535,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,2.05251473624864,2.04648031415566,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.995184627411951,0,0.553995408531877,1.40381113229099,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0.755751887377619,0.242584061187816,0.929716147622738,1.23350366406548,0.929119112685311,1.43846196161075,1.5369642391746,0.709446689665756,0.689491361473237,1.93645405075148,1.35426486594342,1.88242339542605,0.272906150057846,0.449446968890169,2.75475503133812,0,0.639337125799041,0.659702600373432,0.997318288108159,0.426224750532694,3.19230162491442,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,0.217188844705117,3.02699751316684,0,1.89877432464531,1.05627643155971,1.06302149982522,0,0.44931452458598,1.20141514273205,0.16072558669708,0,1.19350006319454,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,2.35806457649499,0.411202997999018,0.167186495390678,0,0,0,0.668462741311041,0.294605907474837,0.443067789167242,0,0.512365278902701,0.650296737799391,1.15106533222573,0.552700035571697,0.289803085735052,0.296573126324121,0,1.04535523804977,0.566546713487831,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,0,2.40696176205157,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27183175558278,1.56716763569341,2.52620124985844,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,2.6487785964879,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,2.10603838625314,0.891786973732369,0,0,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0,1.79336230389644,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0,0,8.98808428736619,38.8909896965232,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.490080431962063,1.30062222588003,0,0.355709216742071,0.797131363644112,0.997896857164083,0.5745161103971,1.05836791361941,0,0.561594356226918,0.456469358066384,0.47003968731907,0,0.169291777801603,0.481764225311099,1.41259795033733,0,1.37402137902306,0,0,0,0.976940477010201,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,6.13159789174419,0,0.498635045700469,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.313265848516366,0.067401132980677,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18542664892098,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.930053882193542,1.30852315404675,1.96565909307848,0,0,1.79988656269437,0.213383459388282,0.688859918643263,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0,0.599646935549574,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.203977659483963,0,0.275684698604535,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.24397944612263 | ||
|short_description=p15@LCP1 | |||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p15@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -22bp_to_CU679665, DQ892935, DQ896184_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.65e-27 | 76 |
hematopoietic system | 5.79e-25 | 98 |
blood island | 5.79e-25 | 98 |
bone element | 1.59e-24 | 82 |
immune system | 1.00e-22 | 93 |
hemolymphoid system | 5.57e-22 | 108 |
skeletal element | 9.12e-22 | 90 |
skeletal system | 6.14e-19 | 100 |
connective tissue | 2.33e-15 | 371 |
musculoskeletal system | 8.37e-09 | 167 |
lateral plate mesoderm | 2.12e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.08e-07 | 51 |
immune system cancer | 2.08e-07 | 51 |