FFCP PHASE1:Hg19::chr7:100201583..100201598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5118 | |EntrezGene=5118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |HGNC=8738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000487172_5end | |association_with_transcript=-56bp_to_ENST00000487172_5end | ||
|cluster_id=chr7:100201583..100201598,+ | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_18_at_PCOLCE_5end | |description=CAGE_peak_18_at_PCOLCE_5end | ||
|id=chr7:100201583..100201598,+ | |id=chr7:100201583..100201598,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.24e-31!180;CL:0000057!3.50e-25!75;CL:0000048!1.20e-13!430;CL:0000723!5.98e-13!436;CL:0000034!7.77e-13!444;CL:0000499!1.52e-11!27;CL:0000183!6.75e-11!59;CL:0000187!1.77e-10!54;CL:0000680!3.58e-10!57;CL:0000056!3.58e-10!57;CL:0000355!3.58e-10!57;CL:0000327!5.36e-10!14;CL:0002320!1.25e-09!365;CL:0002620!1.78e-09!23;CL:0000393!1.49e-08!60;CL:0000211!1.49e-08!60;CL:0000153!2.39e-08!9;CL:0000447!2.39e-08!9;CL:0002334!3.71e-08!12;CL:0000188!4.64e-08!9;CL:0002371!1.87e-07!591;CL:0000134!4.06e-07!358 | |ontology_enrichment_celltype=CL:0000055!4.24e-31!180;CL:0000057!3.50e-25!75;CL:0000048!1.20e-13!430;CL:0000723!5.98e-13!436;CL:0000034!7.77e-13!444;CL:0000499!1.52e-11!27;CL:0000183!6.75e-11!59;CL:0000187!1.77e-10!54;CL:0000680!3.58e-10!57;CL:0000056!3.58e-10!57;CL:0000355!3.58e-10!57;CL:0000327!5.36e-10!14;CL:0002320!1.25e-09!365;CL:0002620!1.78e-09!23;CL:0000393!1.49e-08!60;CL:0000211!1.49e-08!60;CL:0000153!2.39e-08!9;CL:0000447!2.39e-08!9;CL:0002334!3.71e-08!12;CL:0000188!4.64e-08!9;CL:0002371!1.87e-07!591;CL:0000134!4.06e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000499;1.65e-14;28!CL:0000153;1.05e-12;9!CL:0000447;1.05e-12;9!CL:0000135;1.46e-10;3!CL:0000388;1.46e-10;3!CL:0000327;5.06e-10;15!CL:0000138;1.13e-08;6!CL:0002575;9.87e-08;2!CL:0002570;9.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,9.17e-15,28;CL:0000153,8.33e-13,9;CL:0000447,8.33e-13,9;CL:0000135,8.46e-11,3;CL:0000388,8.46e-11,3;CL:0000327,4.36e-10,15;CL:0002320,8.18e-10,361;CL:0000057,1.01e-09,76;CL:0000048,8.74e-09,427;CL:0000058,9.48e-09,6;CL:0000138,9.48e-09,6;CL:0000723,1.68e-08,433;CL:0000034,3.88e-08,441;CL:0002575,4.22e-08,2;CL:0000134,7.70e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.20e-13!83;UBERON:0002329!1.20e-13!83;UBERON:0003077!1.20e-13!83;UBERON:0003059!1.20e-13!83;UBERON:0007282!1.20e-13!83;UBERON:0009618!1.20e-13!83;UBERON:0007285!1.20e-13!83;UBERON:0004290!1.57e-10!70;UBERON:0001134!7.91e-10!61;UBERON:0002036!7.91e-10!61;UBERON:0003082!7.91e-10!61;UBERON:0003102!8.43e-10!95;UBERON:0000486!8.63e-10!82;UBERON:0002384!9.23e-10!375;UBERON:0002385!3.20e-09!63;UBERON:0001015!3.20e-09!63;UBERON:0000383!3.20e-09!63;UBERON:0002199!2.37e-08!45;UBERON:0002416!2.37e-08!45;UBERON:0005256!2.82e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.46e-10;3!UBERON:0000043;1.46e-10;3!UBERON:0007845;1.46e-10;3!UBERON:0004905;1.73e-10;8!UBERON:0000982;1.73e-10;8!UBERON:0004770;1.73e-10;8!UBERON:0001013;8.23e-08;14!UBERON:0000075;7.22e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,8.46e-11,3;UBERON:0000043,8.46e-11,3;UBERON:0007845,8.46e-11,3;UBERON:0004905,9.59e-11,8;UBERON:0000982,9.59e-11,8;UBERON:0004770,9.59e-11,8;UBERON:0002384,2.97e-09,371;UBERON:0001013,1.60e-07,14;UBERON:0000075,4.64e-07,16 | |||
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| ||
|short_description=p18@PCOLCE | |short_description=p18@PCOLCE | ||
}} | }} |
Latest revision as of 07:43, 20 September 2015
Short description: | p18@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PCOLCE_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | -56bp_to_ENST00000487172_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 9.17e-15 | 28 |
GAG secreting cell | 8.33e-13 | 9 |
carbohydrate secreting cell | 8.33e-13 | 9 |
fibrocyte | 8.46e-11 | 3 |
tendon cell | 8.46e-11 | 3 |
extracellular matrix secreting cell | 4.36e-10 | 15 |
connective tissue cell | 8.18e-10 | 361 |
fibroblast | 1.01e-09 | 76 |
multi fate stem cell | 8.74e-09 | 427 |
chondroblast | 9.48e-09 | 6 |
chondrocyte | 9.48e-09 | 6 |
somatic stem cell | 1.68e-08 | 433 |
stem cell | 3.88e-08 | 441 |
central nervous system pericyte | 4.22e-08 | 2 |
mesenchymal cell | 7.70e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 8.46e-11 | 3 |
tendon | 8.46e-11 | 3 |
regular connective tissue | 8.46e-11 | 3 |
articulation | 9.59e-11 | 8 |
skeletal joint | 9.59e-11 | 8 |
articular system | 9.59e-11 | 8 |
connective tissue | 2.97e-09 | 371 |
adipose tissue | 1.60e-07 | 14 |
subdivision of skeletal system | 4.64e-07 | 16 |