FFCP PHASE1:Hg19::chr13:44495610..44495646,+: Difference between revisions
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|id=chr13:44495610..44495646,+
|short_description=p@chr13:44495610..44495646,+
|description=CAGE_peak_at_chr13:44495610..44495646,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:44495610..44495646,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr13:44495610..44495646,+ | |||
|id=chr13:44495610..44495646,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.05e-18;2!UBERON:0008947;5.05e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-20!115;UBERON:0003127!4.19e-17!2;UBERON:0000341!6.75e-17!2;UBERON:0002619!2.73e-11!22;UBERON:0000956!6.20e-10!25;UBERON:0000203!6.20e-10!25;UBERON:0001301!1.74e-09!1;UBERON:0006834!3.58e-09!1;UBERON:0002171!4.19e-09!1;UBERON:0006518!4.19e-09!1;UBERON:0008949!4.19e-09!1;UBERON:0000101!4.19e-09!1;UBERON:0002167!4.19e-09!1;UBERON:0003112!4.54e-09!1;UBERON:0000032!4.54e-09!1;UBERON:0005253!4.54e-09!1;UBERON:0003128!4.54e-09!1;UBERON:0002241!4.54e-09!1;UBERON:0001703!4.54e-09!1;UBERON:0004761!4.54e-09!1;UBERON:0009617!4.54e-09!1;UBERON:0002022!8.49e-09!1;UBERON:0001950!8.59e-09!20;UBERON:0002372!1.16e-08!1;UBERON:0001961!1.16e-08!1;UBERON:0001744!1.16e-08!1;UBERON:0001735!1.16e-08!1;UBERON:0002780!5.00e-08!41;UBERON:0001890!5.00e-08!41;UBERON:0006240!5.00e-08!41;UBERON:0003080!8.01e-08!42;UBERON:0001869!1.00e-07!32;UBERON:0002791!1.75e-07!33;UBERON:0002020!2.95e-07!34;UBERON:0003528!2.95e-07!34;UBERON:0001893!2.95e-07!34;UBERON:0000349!5.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.05e-34;1!UBERON:0003127;5.48e-18;2!UBERON:0000341;9.87e-18;2!UBERON:0006947;2.19e-12;3!UBERON:0004054;2.19e-12;3!UBERON:0005904;1.27e-09;4!UBERON:0005178;1.73e-07;34!UBERON:0002224;1.73e-07;34!UBERON:0002048;5.65e-07;22!UBERON:0000117;5.65e-07;22!UBERON:0000171;5.65e-07;22!UBERON:0000170;5.65e-07;22!UBERON:0000974;8.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.58e-34,1;UBERON:0003127,5.48e-18,2;UBERON:0000341,1.07e-17,2;UBERON:0006947,2.07e-12,3;UBERON:0004054,2.07e-12,3;UBERON:0005904,1.22e-09,4;UBERON:0005178,1.67e-09,34;UBERON:0002224,1.67e-09,34;UBERON:0005181,2.97e-09,35;UBERON:0008947,1.41e-08,38;UBERON:0003258,1.41e-08,38;UBERON:0002048,5.74e-07,22;UBERON:0000117,5.74e-07,22;UBERON:0000171,5.74e-07,22;UBERON:0000170,5.74e-07,22;UBERON:0005597,5.74e-07,22;UBERON:0000118,5.74e-07,22 | |||
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|short_description=p@chr13:44495610..44495646,+ | |||
}} | }} |
Latest revision as of 16:10, 24 July 2015
Short description: | p@chr13:44495610..44495646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:44495610..44495646, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.58e-34 | 1 |
open tracheal system trachea | 5.48e-18 | 2 |
throat | 1.07e-17 | 2 |
male genital duct | 2.07e-12 | 3 |
internal male genitalia | 2.07e-12 | 3 |
duct of male reproductive system | 1.22e-09 | 4 |
thoracic cavity element | 1.67e-09 | 34 |
thoracic cavity | 1.67e-09 | 34 |
thoracic segment organ | 2.97e-09 | 35 |
respiratory primordium | 1.41e-08 | 38 |
endoderm of foregut | 1.41e-08 | 38 |
lung | 5.74e-07 | 22 |
respiratory tube | 5.74e-07 | 22 |
respiration organ | 5.74e-07 | 22 |
pair of lungs | 5.74e-07 | 22 |
lung primordium | 5.74e-07 | 22 |
lung bud | 5.74e-07 | 22 |