FFCP PHASE1:Hg19::chr6:83104756..83104776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:83104756..83104776,+ | |||
|coexpression_cluster_id=C2061 | |||
|description=CAGE_peak_at_chr6:83104756..83104776,+ | |description=CAGE_peak_at_chr6:83104756..83104776,+ | ||
|id=chr6:83104756..83104776,+ | |id=chr6:83104756..83104776,+ | ||
|ontology_enrichment_celltype=CL:0002076!9.25e-12!43;CL:0000082!4.72e-10!19;CL:0002251!2.75e-09!21;CL:0000223!1.35e-08!59;CL:0000322!5.54e-08!3;CL:0002231!7.76e-08!3 | |ontology_enrichment_celltype=CL:0002076!9.25e-12!43;CL:0000082!4.72e-10!19;CL:0002251!2.75e-09!21;CL:0000223!1.35e-08!59;CL:0000322!5.54e-08!3;CL:0002231!7.76e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002251;4.25e-23;20!CL:0000322;9.45e-18;3!CL:0002076;2.25e-17;42!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,3.95e-23,20;CL:0002076,1.19e-19,42;CL:0000322,1.12e-17,3;CL:0000223,1.72e-14,58;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.41e-13!14;DOID:1324!1.46e-12!15;DOID:1325!2.66e-12!7;DOID:3904!2.66e-12!7;DOID:0050615!8.10e-12!16;DOID:3910!2.47e-11!2;DOID:3905!8.84e-10!9;DOID:305!5.46e-09!106;DOID:7!1.35e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:3910;7.14e-26;2!DOID:1749;3.17e-15;14!DOID:3908;3.26e-11;5!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:7;2.62e-08;39!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.18e-26,2;DOID:1749,2.95e-15,14;DOID:7,2.38e-12,39;DOID:3908,3.60e-11,5;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:305,2.62e-08,106;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.82e-21!4;UBERON:0004785!3.82e-21!4;UBERON:0003729!3.95e-17!5;UBERON:0004903!2.47e-11!2;UBERON:0002173!2.47e-11!2;UBERON:0002186!2.47e-11!2;UBERON:0004802!4.72e-10!19;UBERON:0000115!4.72e-10!19;UBERON:0000974!4.75e-09!10;UBERON:0005153!6.46e-09!37;UBERON:0002048!9.18e-09!22;UBERON:0000117!9.18e-09!22;UBERON:0000171!9.18e-09!22;UBERON:0000170!9.18e-09!22;UBERON:0005597!9.18e-09!22;UBERON:0000118!9.18e-09!22;UBERON:0004821!5.54e-08!3;UBERON:0003215!5.54e-08!3;UBERON:0002299!5.54e-08!3;UBERON:0006524!5.54e-08!3;UBERON:0008874!5.54e-08!3;UBERON:0002169!5.54e-08!3;UBERON:0004894!5.54e-08!3;UBERON:0000344!1.09e-07!12;UBERON:0001004!4.80e-07!72;UBERON:0004807!5.25e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.00e-50;4!UBERON:0004785;4.00e-50;4!UBERON:0000974;7.07e-34;6!UBERON:0006562;7.14e-26;2!UBERON:0004903;7.14e-26;2!UBERON:0002173;7.14e-26;2!UBERON:0002186;7.14e-26;2!UBERON:0004821;9.45e-18;3!UBERON:0007499;9.45e-18;3!UBERON:0003215;9.45e-18;3!UBERON:0010368;9.45e-18;3!UBERON:0009911;9.45e-18;3!UBERON:0002299;9.45e-18;3!UBERON:0006524;9.45e-18;3!UBERON:0008874;9.45e-18;3!UBERON:0002169;9.45e-18;3!UBERON:0004894;9.45e-18;3!UBERON:0003729;2.63e-16;13!UBERON:0009856;1.13e-13;4!UBERON:0000161;1.63e-11;19!UBERON:0000166;1.63e-11;19!UBERON:0000344;5.42e-11;20!UBERON:0000165;3.78e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.11e-50,4;UBERON:0004785,3.11e-50,4;UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0000974,6.99e-21,10;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0003729,2.43e-16,13;UBERON:0000344,5.16e-11,20;UBERON:0000166,4.14e-10,22;UBERON:0000165,6.44e-08,29;UBERON:0000930,6.44e-08,29;UBERON:0001004,6.64e-07,74 | |||
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|short_description=p@chr6:83104756..83104776,+ | |short_description=p@chr6:83104756..83104776,+ | ||
}} | }} |
Latest revision as of 03:29, 31 July 2015
Short description: | p@chr6:83104756..83104776, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:83104756..83104776, + |
Coexpression cluster: | C2061_oral_ductal_choriocarcinoma_acantholytic_epidermoid_Lens_pharyngeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 3.95e-23 | 20 |
endo-epithelial cell | 1.19e-19 | 42 |
pneumocyte | 1.12e-17 | 3 |
endodermal cell | 1.72e-14 | 58 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.11e-50 | 4 |
respiratory system mucosa | 3.11e-50 | 4 |
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
neck | 6.99e-21 | 10 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
mouth mucosa | 2.43e-16 | 13 |
mucosa | 5.16e-11 | 20 |
oral opening | 4.14e-10 | 22 |
mouth | 6.44e-08 | 29 |
stomodeum | 6.44e-08 | 29 |
respiratory system | 6.64e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.18e-26 | 2 |
squamous cell carcinoma | 2.95e-15 | 14 |
disease of anatomical entity | 2.38e-12 | 39 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 8.85e-07 | 9 |