FFCP PHASE1:Hg19::chr6:82462377..82462405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55603 | |EntrezGene=55603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18345 | |HGNC=18345 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003pjh.1_5end | |association_with_transcript=0bp_to_uc003pjh.1_5end | ||
|cluster_id=chr6:82462377..82462405,- | |||
|description=CAGE_peak_1_at_FAM46A_5end | |description=CAGE_peak_1_at_FAM46A_5end | ||
|id=chr6:82462377..82462405,- | |id=chr6:82462377..82462405,- | ||
|ontology_enrichment_celltype=CL:0000766!1.07e-19!76;CL:0000557!9.99e-19!71;CL:0000839!6.26e-17!70;CL:0002320!6.96e-17!365;CL:0000134!1.83e-16!358;CL:0002009!1.22e-15!65;CL:0000763!3.92e-15!112;CL:0000049!3.92e-15!112;CL:0002194!4.53e-15!63;CL:0000576!4.53e-15!63;CL:0000040!4.53e-15!63;CL:0000559!4.53e-15!63;CL:0000860!2.70e-13!45;CL:0000048!7.63e-13!430;CL:0000219!5.23e-12!390;CL:0000723!5.27e-12!436;CL:0002057!8.59e-12!42;CL:0000034!4.17e-11!444;CL:0000738!7.92e-07!140 | |ontology_enrichment_celltype=CL:0000766!1.07e-19!76;CL:0000557!9.99e-19!71;CL:0000839!6.26e-17!70;CL:0002320!6.96e-17!365;CL:0000134!1.83e-16!358;CL:0002009!1.22e-15!65;CL:0000763!3.92e-15!112;CL:0000049!3.92e-15!112;CL:0002194!4.53e-15!63;CL:0000576!4.53e-15!63;CL:0000040!4.53e-15!63;CL:0000559!4.53e-15!63;CL:0000860!2.70e-13!45;CL:0000048!7.63e-13!430;CL:0000219!5.23e-12!390;CL:0000723!5.27e-12!436;CL:0002057!8.59e-12!42;CL:0000034!4.17e-11!444;CL:0000738!7.92e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000576;2.98e-09;48!CL:0000860;1.54e-08;33!CL:0002057;1.54e-08;33!CL:0000766;1.88e-08;69!CL:0000473;1.10e-07;39!CL:0000234;1.10e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.02e-18,72;CL:0000557,4.60e-17,67;CL:0002320,2.64e-16,361;CL:0000134,6.78e-16,354;CL:0000839,2.61e-15,66;CL:0002009,4.90e-14,61;CL:0000763,1.17e-13,108;CL:0000049,1.17e-13,108;CL:0002194,1.78e-13,59;CL:0000576,1.78e-13,59;CL:0000040,1.78e-13,59;CL:0000559,1.78e-13,59;CL:0000048,1.84e-12,427;CL:0000473,5.64e-12,48;CL:0000234,5.64e-12,48;CL:0000860,8.46e-12,42;CL:0002057,8.46e-12,42;CL:0000723,1.26e-11,433;CL:0000219,1.64e-11,386;CL:0000034,9.80e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.54e-17!86;UBERON:0002371!2.17e-17!80;UBERON:0002384!1.07e-16!375;UBERON:0004765!1.63e-15!101;UBERON:0001434!1.63e-15!101;UBERON:0002390!6.76e-15!102;UBERON:0003061!6.76e-15!102;UBERON:0002204!4.70e-13!167;UBERON:0002193!7.99e-11!112;UBERON:0000926!2.09e-10!448;UBERON:0004120!2.09e-10!448;UBERON:0006603!2.09e-10!448;UBERON:0002405!1.14e-09!115;UBERON:0000479!1.26e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.86e-16,371;UBERON:0001474,5.65e-16,82;UBERON:0002371,8.60e-16,76;UBERON:0004765,5.15e-15,90;UBERON:0001434,2.30e-14,100;UBERON:0002390,2.10e-13,98;UBERON:0003061,2.10e-13,98;UBERON:0002204,2.84e-12,167;UBERON:0002193,1.46e-09,108;UBERON:0002405,3.86e-09,93;UBERON:0000926,5.44e-09,315;UBERON:0004120,5.44e-09,315;UBERON:0006603,5.44e-09,315;UBERON:0000479,9.48e-08,773 | |||
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| ||
|short_description=p1@FAM46A | |short_description=p1@FAM46A | ||
}} | }} |
Latest revision as of 23:13, 19 September 2015
Short description: | p1@FAM46A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM46A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003pjh.1_5end |
EntrezGene: | FAM46A |
HGNC: | 18345 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.02e-18 | 72 |
granulocyte monocyte progenitor cell | 4.60e-17 | 67 |
connective tissue cell | 2.64e-16 | 361 |
mesenchymal cell | 6.78e-16 | 354 |
myeloid lineage restricted progenitor cell | 2.61e-15 | 66 |
macrophage dendritic cell progenitor | 4.90e-14 | 61 |
myeloid cell | 1.17e-13 | 108 |
common myeloid progenitor | 1.17e-13 | 108 |
monopoietic cell | 1.78e-13 | 59 |
monocyte | 1.78e-13 | 59 |
monoblast | 1.78e-13 | 59 |
promonocyte | 1.78e-13 | 59 |
multi fate stem cell | 1.84e-12 | 427 |
defensive cell | 5.64e-12 | 48 |
phagocyte | 5.64e-12 | 48 |
classical monocyte | 8.46e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.46e-12 | 42 |
somatic stem cell | 1.26e-11 | 433 |
motile cell | 1.64e-11 | 386 |
stem cell | 9.80e-11 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.86e-16 | 371 |
bone element | 5.65e-16 | 82 |
bone marrow | 8.60e-16 | 76 |
skeletal element | 5.15e-15 | 90 |
skeletal system | 2.30e-14 | 100 |
hematopoietic system | 2.10e-13 | 98 |
blood island | 2.10e-13 | 98 |
musculoskeletal system | 2.84e-12 | 167 |
hemolymphoid system | 1.46e-09 | 108 |
immune system | 3.86e-09 | 93 |
mesoderm | 5.44e-09 | 315 |
mesoderm-derived structure | 5.44e-09 | 315 |
presumptive mesoderm | 5.44e-09 | 315 |
tissue | 9.48e-08 | 773 |