FFCP PHASE1:Hg19::chr6:79960170..79960171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:79960170..79960171,- | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr6:79960170..79960171,- | |description=CAGE_peak_at_chr6:79960170..79960171,- | ||
|id=chr6:79960170..79960171,- | |id=chr6:79960170..79960171,- | ||
|ontology_enrichment_celltype=CL:1000415!1.73e-08!2 | |ontology_enrichment_celltype=CL:1000415!1.73e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.66e-15;1!CL:1000415;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,8.63e-16,1;CL:1000415,2.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.66e-15;1!UBERON:0010122;2.07e-08;2!UBERON:0001041;6.07e-08;30 | |||
|ontology_enrichment_disease=DOID:4468!8.64e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003343!9.85e-09!4;UBERON:0004785!9.85e-09!4;UBERON:0003729!4.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.66e-15;1!UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0005208;1.66e-15;1!UBERON:0004145;1.66e-15;1!UBERON:0005946;1.66e-15;1!UBERON:0005965;1.66e-15;1!UBERON:0002078;1.66e-15;1!UBERON:0002294;3.50e-09;7!UBERON:0001173;3.50e-09;7!UBERON:0001873;2.07e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0002081;2.07e-08;2!UBERON:0002133;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,9.99e-16,1;UBERON:0005208,9.99e-16,1;UBERON:0005946,9.99e-16,1;UBERON:0005965,9.99e-16,1;UBERON:0002078,9.99e-16,1;UBERON:0000941,1.16e-15,1;UBERON:0001785,1.16e-15,1;UBERON:0002464,1.16e-15,1;UBERON:0004904,1.16e-15,1;UBERON:0001021,1.16e-15,1;UBERON:0003902,1.16e-15,1;UBERON:0005425,1.16e-15,1;UBERON:0002081,1.61e-08,2;UBERON:0002133,1.61e-08,2;UBERON:0010227,1.61e-08,2;UBERON:0003714,1.73e-08,2;UBERON:0005162,1.73e-08,2;UBERON:0000122,1.73e-08,2;UBERON:0001873,2.00e-08,2;UBERON:0010122,2.00e-08,2;UBERON:0002294,2.52e-07,9;UBERON:0001173,2.52e-07,9;UBERON:0004912,2.52e-07,9 | |||
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| ||
|short_description=p@chr6:79960170..79960171,- | |short_description=p@chr6:79960170..79960171,- | ||
}} | }} |
Latest revision as of 03:22, 31 July 2015
Short description: | p@chr6:79960170..79960171, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:79960170..79960171, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 8.63e-16 | 1 |
epithelial cell of gall bladder | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 9.99e-16 | 1 |
right atrium valve | 9.99e-16 | 1 |
outflow tract of atrium | 9.99e-16 | 1 |
outflow part of right atrium | 9.99e-16 | 1 |
right cardiac atrium | 9.99e-16 | 1 |
cranial nerve II | 1.16e-15 | 1 |
cranial nerve | 1.16e-15 | 1 |
nerve trunk | 1.16e-15 | 1 |
nerve connecting eye with brain | 1.16e-15 | 1 |
nerve | 1.16e-15 | 1 |
retinal neural layer | 1.16e-15 | 1 |
presumptive neural retina | 1.16e-15 | 1 |
cardiac atrium | 1.61e-08 | 2 |
atrioventricular valve | 1.61e-08 | 2 |
future cardiac atrium | 1.61e-08 | 2 |
neural tissue | 1.73e-08 | 2 |
multi cell component structure | 1.73e-08 | 2 |
neuron projection bundle | 1.73e-08 | 2 |
caudate nucleus | 2.00e-08 | 2 |
future caudate nucleus | 2.00e-08 | 2 |
biliary system | 2.52e-07 | 9 |
biliary tree | 2.52e-07 | 9 |
biliary bud | 2.52e-07 | 9 |