FFCP PHASE1:Hg19::chr21:21630930..21630941,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_ENST00000436373_5end | |association_with_transcript=191bp_to_ENST00000436373_5end | ||
|cluster_id=chr21:21630930..21630941,- | |||
|coexpression_cluster_id=C1677 | |||
|description=CAGE_peak_3_at_ENST00000436373_5end | |description=CAGE_peak_3_at_ENST00000436373_5end | ||
|id=chr21:21630930..21630941,- | |id=chr21:21630930..21630941,- | ||
|ontology_enrichment_celltype=CL:0000763!1.46e-14!112;CL:0000049!1.46e-14!112;CL:0000037!3.56e-11!172;CL:0000566!3.56e-11!172;CL:0000988!2.21e-10!182;CL:0001024!2.40e-09!1;CL:0002032!5.77e-09!165;CL:0000837!5.77e-09!165 | |ontology_enrichment_celltype=CL:0000763!1.46e-14!112;CL:0000049!1.46e-14!112;CL:0000037!3.56e-11!172;CL:0000566!3.56e-11!172;CL:0000988!2.21e-10!182;CL:0001024!2.40e-09!1;CL:0002032!5.77e-09!165;CL:0000837!5.77e-09!165 | ||
|ontology_enrichment_celltype_v019=CL:0000037;2.78e-13;1!CL:0001024;2.78e-13;1!CL:0000763;2.06e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,2.95e-13,1;CL:0000763,1.38e-11,108;CL:0000049,1.38e-11,108;CL:0000037,2.15e-08,168;CL:0000988,6.96e-08,177;CL:0002032,2.65e-07,161;CL:0000837,2.65e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!9.14e-61!31;DOID:1240!1.00e-47!39;DOID:2531!7.96e-36!51;DOID:0060083!7.96e-36!51;DOID:1036!1.25e-33!8;DOID:0050686!2.19e-11!137;DOID:8552!2.22e-09!1;DOID:9119!3.05e-09!1;DOID:225!4.54e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.74e-42;31!DOID:1240;1.16e-24;39!DOID:2531;7.56e-20;51!DOID:0060083;7.56e-20;51!DOID:8552;2.78e-13;1!DOID:9119;4.23e-13;1!DOID:225;6.43e-13;1!DOID:74;4.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.43e-44,31;DOID:1240,7.16e-35,39;DOID:2531,2.32e-26,51;DOID:0060083,2.32e-26,51;DOID:8552,2.62e-13,1;DOID:9119,4.23e-13,1;DOID:225,7.68e-13,1;DOID:0050686,7.75e-09,137;DOID:74,4.69e-07,2;DOID:1036,9.94e-07,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16560922603179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,4.48406850385229,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,1.29694662238543,0,0,0,0,0,0,0,0,0,10.9768654288049,2.48956981172077,0,0.324621940274555,11.5126843026518,0,0,0,3.21654377823046,0,0,0,0,0,0,0,0,0,1.23087398947712,9.73640442513539,3.3307196799782,2.81974010175699,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98089063980657,0.451191321234361,0.19606253431774,0.671286347903371,0.75901493089674,3.49660473756833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.4776653734881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02714286418868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16560922603179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,4.48406850385229,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,1.29694662238543,0,0,0,0,0,0,0,0,0,10.9768654288049,2.48956981172077,0,0.324621940274555,11.5126843026518,0,0,0,3.21654377823046,0,0,0,0,0,0,0,0,0,1.23087398947712,9.73640442513539,3.3307196799782,2.81974010175699,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98089063980657,0.451191321234361,0.19606253431774,0.671286347903371,0.75901493089674,3.49660473756833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.4776653734881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02714286418868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000436373 | |short_description=p3@ENST00000436373 | ||
}} | }} |
Latest revision as of 16:54, 28 July 2015
Short description: | p3@ENST00000436373 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000436373_5end |
Coexpression cluster: | C1677_acute_CD34_CD133_chronic_Whole_leukemia_myelodysplastic |
Association with transcript: | 191bp_to_ENST00000436373_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 2.95e-13 | 1 |
myeloid cell | 1.38e-11 | 108 |
common myeloid progenitor | 1.38e-11 | 108 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 6.96e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.65e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.43e-44 | 31 |
leukemia | 7.16e-35 | 39 |
hematologic cancer | 2.32e-26 | 51 |
immune system cancer | 2.32e-26 | 51 |
chronic myeloid leukemia | 2.62e-13 | 1 |
acute myeloid leukemia | 4.23e-13 | 1 |
syndrome | 7.68e-13 | 1 |
organ system cancer | 7.75e-09 | 137 |
hematopoietic system disease | 4.69e-07 | 2 |
chronic leukemia | 9.94e-07 | 8 |