FFCP PHASE1:Hg19::chr20:61298826..61298834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |EntrezGene=28231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |HGNC=10953 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495889_5end | |association_with_transcript=0bp_to_ENST00000495889_5end | ||
|cluster_id=chr20:61298826..61298834,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_13_at_SLCO4A1_5end | |description=CAGE_peak_13_at_SLCO4A1_5end | ||
|id=chr20:61298826..61298834,+ | |id=chr20:61298826..61298834,+ | ||
|ontology_enrichment_celltype=CL:0002178!4.12e-23!3;CL:0000181!1.82e-22!12;CL:0000417!1.82e-22!12;CL:0000668!1.82e-22!12;CL:0000414!1.82e-22!12;CL:0000412!1.82e-22!12;CL:0000182!1.82e-22!12;CL:0002566!3.16e-18!1;CL:0000223!5.77e-10!59;CL:0000148!1.20e-07!10;CL:0000541!1.20e-07!10;CL:0002567!7.70e-07!3;CL:0000214!9.12e-07!3 | |ontology_enrichment_celltype=CL:0002178!4.12e-23!3;CL:0000181!1.82e-22!12;CL:0000417!1.82e-22!12;CL:0000668!1.82e-22!12;CL:0000414!1.82e-22!12;CL:0000412!1.82e-22!12;CL:0000182!1.82e-22!12;CL:0002566!3.16e-18!1;CL:0000223!5.77e-10!59;CL:0000148!1.20e-07!10;CL:0000541!1.20e-07!10;CL:0002567!7.70e-07!3;CL:0000214!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002566;2.55e-98;1!CL:0002178;4.27e-34;3!CL:0000148;3.02e-11;10!CL:0000147;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,2.55e-98,1;CL:0002178,4.27e-34,3;CL:0000148,3.02e-11,10;CL:0000541,3.02e-11,10;CL:0000147,2.00e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5662!8.72e-18!1;DOID:3493!7.98e-10!2;DOID:305!2.78e-07!106;DOID:7!3.95e-07!39;DOID:4556!7.28e-07!3;DOID:0050687!7.67e-07!143 | |ontology_enrichment_disease=DOID:5662!8.72e-18!1;DOID:3493!7.98e-10!2;DOID:305!2.78e-07!106;DOID:7!3.95e-07!39;DOID:4556!7.28e-07!3;DOID:0050687!7.67e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.74e-50;2!DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.74e-50,2;DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000945!3.73e-19!8;UBERON:0010039!3.73e-19!8;UBERON:0005057!5.89e-16!26;UBERON:0002107!2.45e-14!19;UBERON:0006925!2.45e-14!19;UBERON:0008836!2.45e-14!19;UBERON:0008835!1.98e-12!22;UBERON:0003894!1.98e-12!22;UBERON:0009854!6.66e-12!23;UBERON:0007499!5.63e-11!25;UBERON:0009497!5.63e-11!25;UBERON:0000015!5.63e-11!25;UBERON:0002423!5.63e-11!25;UBERON:0006235!5.63e-11!25;UBERON:0004161!5.63e-11!25;UBERON:0009856!1.45e-10!26;UBERON:0001041!2.89e-10!98;UBERON:0002365!6.60e-09!31;UBERON:0002330!6.60e-09!31;UBERON:0002368!6.44e-08!35;UBERON:0000077!1.40e-07!130;UBERON:0004921!1.40e-07!129;UBERON:0004185!1.40e-07!129;UBERON:0005172!1.46e-07!55;UBERON:0005173!1.46e-07!55;UBERON:0002417!8.18e-07!61;UBERON:0000916!8.18e-07!61;UBERON:0006915!9.12e-07!3;UBERON:0002018!9.12e-07!3;UBERON:0002217!9.12e-07!3;UBERON:0007616!9.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0001041;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8 | |||
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|short_description=p13@SLCO4A1 | |short_description=p13@SLCO4A1 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p13@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLCO4A1_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000495889_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 2.55e-98 | 1 |
epithelial cell of stomach | 4.27e-34 | 3 |
melanocyte | 3.02e-11 | 10 |
melanoblast | 3.02e-11 | 10 |
pigment cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.74e-50 | 2 |
gastrointestinal system cancer | 1.86e-08 | 14 |