FFCP PHASE1:Hg19::chr13:31191459..31191502,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:31191459..31191502,-
|short_description=p5@HMGB1
|description=CAGE_peak_5_at_HMGB1_5end
|association_with_transcript=7bp_to_uc001usz.2_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3146 | |EntrezGene=3146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4983 | |HGNC=4983 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc001usz.2_5end | |||
|cluster_id=chr13:31191459..31191502,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_HMGB1_5end | |||
|id=chr13:31191459..31191502,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.06e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.06e-31!115;UBERON:0001049!1.81e-29!57;UBERON:0005068!1.81e-29!57;UBERON:0006241!1.81e-29!57;UBERON:0007135!1.81e-29!57;UBERON:0002616!1.41e-28!59;UBERON:0001017!6.33e-27!82;UBERON:0000955!6.83e-27!69;UBERON:0006238!6.83e-27!69;UBERON:0005743!1.34e-26!86;UBERON:0000073!1.75e-25!94;UBERON:0001016!1.75e-25!94;UBERON:0002346!1.76e-25!90;UBERON:0003075!2.85e-25!86;UBERON:0007284!2.85e-25!86;UBERON:0002780!3.71e-23!41;UBERON:0001890!3.71e-23!41;UBERON:0006240!3.71e-23!41;UBERON:0003080!1.06e-22!42;UBERON:0000033!4.14e-22!123;UBERON:0000153!5.36e-22!129;UBERON:0007811!5.36e-22!129;UBERON:0000924!5.74e-20!173;UBERON:0006601!5.74e-20!173;UBERON:0001893!1.47e-19!34;UBERON:0002020!1.49e-19!34;UBERON:0003528!1.49e-19!34;UBERON:0004121!1.61e-19!169;UBERON:0003056!5.40e-19!61;UBERON:0002791!6.87e-19!33;UBERON:0001869!2.87e-18!32;UBERON:0000956!5.67e-14!25;UBERON:0000203!5.67e-14!25;UBERON:0002619!1.58e-13!22;UBERON:0001950!2.08e-12!20;UBERON:0000475!3.08e-12!365;UBERON:0004111!2.45e-11!241;UBERON:0000477!1.14e-10!286;UBERON:0000025!1.26e-10!194;UBERON:0000119!2.92e-10!312;UBERON:0000483!6.64e-10!309;UBERON:0003076!6.57e-08!15;UBERON:0003057!6.57e-08!15;UBERON:0002308!4.15e-07!9;UBERON:0000125!4.15e-07!9;UBERON:0002420!4.68e-07!9;UBERON:0007245!4.68e-07!9;UBERON:0010009!4.68e-07!9;UBERON:0010011!4.68e-07!9;UBERON:0000454!4.68e-07!9;UBERON:0000481!7.49e-07!347;UBERON:0004732!8.59e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.19e-18;34!UBERON:0003528;1.04e-17;34!UBERON:0002020;1.04e-17;34!UBERON:0002780;1.29e-17;41!UBERON:0001890;1.29e-17;41!UBERON:0001869;1.62e-17;32!UBERON:0002791;1.67e-17;32!UBERON:0000073;3.18e-17;53!UBERON:0002616;3.18e-17;53!UBERON:0000956;1.10e-14;25!UBERON:0000203;1.10e-14;25!UBERON:0002619;3.35e-14;22!UBERON:0001017;6.45e-14;75!UBERON:0001950;5.63e-13;20!UBERON:0000955;6.07e-13;68!UBERON:0001016;8.92e-12;83!UBERON:0007023;2.86e-09;114!UBERON:0000125;1.58e-07;9!UBERON:0002308;1.58e-07;9!UBERON:0002420;1.75e-07;9!UBERON:0007245;1.75e-07;9!UBERON:0010009;1.75e-07;9!UBERON:0010011;1.75e-07;9!UBERON:0000454;1.75e-07;9!UBERON:0004732;3.35e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.30e-31,56;UBERON:0005068,1.30e-31,56;UBERON:0006241,1.30e-31,56;UBERON:0007135,1.30e-31,56;UBERON:0007023,2.03e-31,114;UBERON:0000073,1.14e-29,53;UBERON:0002616,1.14e-29,53;UBERON:0002346,3.14e-29,86;UBERON:0003075,4.45e-29,82;UBERON:0007284,4.45e-29,82;UBERON:0000955,2.72e-28,68;UBERON:0006238,2.72e-28,68;UBERON:0001017,6.34e-28,81;UBERON:0001016,1.16e-26,89;UBERON:0002780,1.86e-24,41;UBERON:0001890,1.86e-24,41;UBERON:0003080,1.86e-24,41;UBERON:0006240,1.86e-24,41;UBERON:0004121,1.40e-22,171;UBERON:0000924,1.40e-22,171;UBERON:0006601,1.40e-22,171;UBERON:0010371,1.22e-21,104;UBERON:0010314,4.41e-21,132;UBERON:0003056,8.10e-21,61;UBERON:0001893,1.21e-20,34;UBERON:0003528,1.23e-20,34;UBERON:0002020,1.23e-20,34;UBERON:0001869,2.84e-19,32;UBERON:0002791,3.13e-19,32;UBERON:0000956,1.02e-14,25;UBERON:0000203,1.02e-14,25;UBERON:0002619,3.03e-14,22;UBERON:0001950,4.66e-13,20;UBERON:0004111,5.31e-12,240;UBERON:0000119,1.17e-11,309;UBERON:0000025,2.38e-11,192;UBERON:0000483,2.91e-11,306;UBERON:0011216,8.35e-10,223;UBERON:0003076,2.72e-08,15;UBERON:0003057,2.72e-08,15;UBERON:0000125,1.92e-07,9;UBERON:0002308,1.92e-07,9;UBERON:0002420,2.18e-07,9;UBERON:0007245,2.18e-07,9;UBERON:0010009,2.18e-07,9;UBERON:0010011,2.18e-07,9;UBERON:0000454,2.18e-07,9;UBERON:0004732,4.15e-07,13 | |||
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| ||
|short_description=p5@HMGB1 | |||
}} | }} |
Latest revision as of 02:18, 17 September 2015
Short description: | p5@HMGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMGB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 7bp_to_uc001usz.2_5end |
EntrezGene: | HMGB1 |
HGNC: | 4983 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data