FFCP PHASE1:Hg19::chr20:56283735..56283746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:56283735..56283746,+ | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr20:56283735..56283746,+ | |description=CAGE_peak_at_chr20:56283735..56283746,+ | ||
|id=chr20:56283735..56283746,+ | |id=chr20:56283735..56283746,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000244;7.47e-16;4!CL:0000731;7.47e-16;4!CL:0002368;1.71e-09;13!CL:1000507;1.17e-08;10!CL:1000494;1.17e-08;10!CL:1000449;5.04e-08;15!CL:1000497;5.31e-07;17!CL:0002518;5.31e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.78e-16,4;CL:0000731,7.78e-16,4;CL:0002368,1.85e-09,13;CL:1000507,1.07e-08,10;CL:1000494,1.07e-08,10;CL:1000449,4.63e-08,15;CL:1000497,4.93e-07,17;CL:0002518,4.93e-07,17;CL:0000066,6.94e-07,253;CL:0002076,9.03e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.49e-07!5;UBERON:0006554!7.39e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.16e-19;5!UBERON:0005910;4.20e-16;6!UBERON:0006554;1.18e-12;30!UBERON:0001008;1.18e-12;30!UBERON:0004211;1.17e-08;10!UBERON:0009773;1.17e-08;10!UBERON:0001231;1.17e-08;10!UBERON:0004810;1.17e-08;10!UBERON:0006555;5.04e-08;15!UBERON:0004819;5.04e-08;15!UBERON:0001285;5.04e-08;15!UBERON:0007684;5.04e-08;15!UBERON:0000486;7.42e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.25e-19,5;UBERON:0005910,4.34e-16,6;UBERON:0006554,3.51e-12,47;UBERON:0001008,7.36e-12,48;UBERON:0006555,4.95e-10,16;UBERON:0004819,4.95e-10,16;UBERON:0004810,1.07e-08,10;UBERON:0004211,4.63e-08,15;UBERON:0009773,4.63e-08,15;UBERON:0001231,4.63e-08,15;UBERON:0001285,4.63e-08,15;UBERON:0007684,4.63e-08,15;UBERON:0004208,4.63e-08,15 | |||
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| ||
|short_description=p@chr20:56283735..56283746,+ | |short_description=p@chr20:56283735..56283746,+ | ||
}} | }} |
Latest revision as of 15:43, 28 July 2015
Short description: | p@chr20:56283735..56283746, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:56283735..56283746, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.78e-16 | 4 |
urothelial cell | 7.78e-16 | 4 |
respiratory epithelial cell | 1.85e-09 | 13 |
kidney tubule cell | 1.07e-08 | 10 |
nephron tubule epithelial cell | 1.07e-08 | 10 |
epithelial cell of nephron | 4.63e-08 | 15 |
kidney cell | 4.93e-07 | 17 |
kidney epithelial cell | 4.93e-07 | 17 |
epithelial cell | 6.94e-07 | 253 |
endo-epithelial cell | 9.03e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.25e-19 | 5 |
transitional epithelium | 4.34e-16 | 6 |
urinary system structure | 3.51e-12 | 47 |
renal system | 7.36e-12 | 48 |
excretory tube | 4.95e-10 | 16 |
kidney epithelium | 4.95e-10 | 16 |
nephron tubule epithelium | 1.07e-08 | 10 |
nephron epithelium | 4.63e-08 | 15 |
renal tubule | 4.63e-08 | 15 |
nephron tubule | 4.63e-08 | 15 |
nephron | 4.63e-08 | 15 |
uriniferous tubule | 4.63e-08 | 15 |
nephrogenic mesenchyme | 4.63e-08 | 15 |