FFCP PHASE1:Hg19::chr6:36653561..36653579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:36653561..36653579,+ | |||
|coexpression_cluster_id=C672 | |||
|description=CAGE_peak_at_chr6:36653561..36653579,+ | |description=CAGE_peak_at_chr6:36653561..36653579,+ | ||
|id=chr6:36653561..36653579,+ | |id=chr6:36653561..36653579,+ | ||
|ontology_enrichment_celltype=CL:0002371!4.19e-20!591;CL:0000144!4.54e-20!625;CL:0002057!6.75e-19!42;CL:0000548!2.26e-18!679;CL:0000004!2.26e-18!679;CL:0000255!2.26e-18!679;CL:0000012!1.56e-17!682;CL:0000860!2.50e-16!45;CL:0002009!1.94e-12!65;CL:0000557!5.14e-12!71;CL:0002194!8.71e-12!63;CL:0000576!8.71e-12!63;CL:0000040!8.71e-12!63;CL:0000559!8.71e-12!63;CL:0000063!3.37e-11!578;CL:0000839!7.37e-11!70;CL:0000723!2.94e-10!436;CL:0000766!3.88e-10!76;CL:0000048!1.26e-09!430;CL:0000003!1.29e-09!722;CL:0000034!4.77e-09!444 | |ontology_enrichment_celltype=CL:0002371!4.19e-20!591;CL:0000144!4.54e-20!625;CL:0002057!6.75e-19!42;CL:0000548!2.26e-18!679;CL:0000004!2.26e-18!679;CL:0000255!2.26e-18!679;CL:0000012!1.56e-17!682;CL:0000860!2.50e-16!45;CL:0002009!1.94e-12!65;CL:0000557!5.14e-12!71;CL:0002194!8.71e-12!63;CL:0000576!8.71e-12!63;CL:0000040!8.71e-12!63;CL:0000559!8.71e-12!63;CL:0000063!3.37e-11!578;CL:0000839!7.37e-11!70;CL:0000723!2.94e-10!436;CL:0000766!3.88e-10!76;CL:0000048!1.26e-09!430;CL:0000003!1.29e-09!722;CL:0000034!4.77e-09!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.52e-29;33!CL:0002057;4.52e-29;33!CL:0000473;2.91e-20;39!CL:0000234;2.91e-20;39!CL:0000576;3.01e-13;48!CL:0000766;7.55e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-25,42;CL:0002057,1.32e-25,42;CL:0000473,4.07e-22,48;CL:0000234,4.07e-22,48;CL:0002009,1.04e-17,61;CL:0002194,1.90e-17,59;CL:0000576,1.90e-17,59;CL:0000040,1.90e-17,59;CL:0000559,1.90e-17,59;CL:0000557,4.57e-17,67;CL:0000839,2.42e-16,66;CL:0000766,1.11e-15,72;CL:0000048,1.56e-10,427;CL:0000723,2.14e-10,433;CL:0000034,1.26e-09,441;CL:0000763,4.48e-09,108;CL:0000049,4.48e-09,108;CL:0002320,2.38e-08,361;CL:0000134,2.59e-08,354;CL:0000219,8.12e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.45e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.71e-16!167;UBERON:0002371!1.79e-11!80;UBERON:0001474!1.79e-10!86;UBERON:0004765!2.52e-10!101;UBERON:0001434!2.52e-10!101;UBERON:0003081!7.69e-09!216;UBERON:0000926!7.82e-08!448;UBERON:0004120!7.82e-08!448;UBERON:0006603!7.82e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.75e-08;6!UBERON:0002358;7.75e-08;6!UBERON:0003684;7.75e-08;6!UBERON:0001178;7.75e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.89e-15,167;UBERON:0002371,1.48e-14,76;UBERON:0004765,3.36e-14,90;UBERON:0001434,1.23e-13,100;UBERON:0001474,1.50e-13,82;UBERON:0002405,1.88e-10,93;UBERON:0000926,4.40e-09,315;UBERON:0004120,4.40e-09,315;UBERON:0006603,4.40e-09,315;UBERON:0002390,1.31e-08,98;UBERON:0003061,1.31e-08,98;UBERON:0003081,2.02e-08,203;UBERON:0002384,3.02e-08,371;UBERON:0003688,9.46e-08,6;UBERON:0002358,9.46e-08,6;UBERON:0003684,9.46e-08,6;UBERON:0001178,9.46e-08,6;UBERON:0002193,2.01e-07,108 | |||
|phase1_expression=3.81524596468169,3.8538094300377,3.38290569830331,3.00219895059391,3.5756887554183,4.36169262050184,0,0.631719873426831,0.783556884599516,1.72013755551056,4.18680700783456,0.218441372130172,0.791300934685361,0.247532705920093,1.65698687863958,5.3786011716142,4.82155622419182,1.46062018077475,1.46379839637152,0,0.204000691244253,0.313454721478088,0.286235987131057,0.821246550437305,0,0.229240217243854,0.0821005894499457,0.314843125254717,0.786728553697808,1.15148819429164,1.39334510984468,0.919421224478927,0.30120591877825,3.32778609150109,0.0774672005803016,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0.223915474239924,0,0.257575567634187,2.76256653681173,1.88937971844405,1.94067248950253,7.67015821788759,7.81218987241469,9.91060386864331,20.4261598548727,21.2613386419154,25.5400808279672,7.58440497620561,10.973239620925,21.6682378550947,7.52969358170419,4.91231070104122,7.41587498668779,19.8954530041087,14.7627352455003,16.6227652707751,12.2044981069085,15.7576289521089,14.4916415181116,11.8985787837719,6.80862269629368,14.9477339758938,18.3411525637423,21.9022825736485,19.9813737128707,8.47559303686716,10.3117738076518,13.2914202725171,0.633765858935825,1.27562579979026,0.838634582033504,0.561643155732475,0.600707571366025,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,2.34894875748376,0,0,0,0,0.196709770113833,1.17903228824749,1.02800749499755,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,1.30361867064741,0,0.973269740605272,0,0.665188192387692,0.087834785693126,0,1.82147644146271,1.11235332835329,0.97364218096405,1.21890816109487,2.79211717089617,0.238490624305342,0.571994910780128,0,0,0,0,0,0,1.10047216776027,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0,0.732186172644509,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.732806975721629,0,0,1.3082821564276,1.98788780678127,1.2663051166458,0.397227542439656,0.573673241497627,1.77334191099179,0,2.1349799145941,0.98667019366864,0.311211035399766,0.67355336034844,0.163461903113459,0,0,0.937285727335186,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.826606249406124,0,3.21447008062124,0,3.59309070908119,0,0.125118519871964,0,0,1.5324389789951,1.50238058906597,0.113432183160021,0,0.85422955527427,0.635795703478686,0.300091096084402,1.23663035086127,0.772921620136887,1.11670113798954,0.337552664482532,0.68205903612839,0.252433774244115,0.644349290496095,0.646584227275248,0,1.0075209822764,0.169560592310488,0.193260853163297,1.36373060295417,0,0.121973706129595,0,0,0.310983165046111,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0.330881918197182,0,0.237270619111097,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0.514703430895577,0.878002283269004,2.24803506515239,0.402115889646523,0.555530670951178,0.977424915930974,2.07986957055916,0,0.34779121492523,0.234817388471643,0.721832238805369,0.925971025153221,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0,1.87467667973554,1.34385702559088,0.850650583454319,0.985143749731331,1.16253575405585,1.15014803749563,0,0.352193736052904,0.414656231081544,4.75595846275973,1.00993946741104,0.063497894292169,2.29193055334967,1.17217447210047,3.4214489204541,0.514137463516618,0.300343057843917,1.42913216315289,0,0,0.07333828582095,0.904902010304444,7.15312891703765,0.845302752556,0.797814349754612,4.16029747645464,0.257207374262142,0,0.532844358032199,0.285955987316295,0.542621605391443,4.11620168390384,0.325736184293735,0,1.58390374586686,1.20575750823834,1.74306691720059,1.49959486773086,1.2162378064119,0.502257091432126,0,1.19812427745791,1.14861935834114,0,0.723906533337896,0.410952645100767,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0,1.01637849688985,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,1.03985430765404,1.78428988797162,2.05013139544115,0.937131319941706,1.20378439891088,29.562975527278,4.1389228517002,0.664225598535437,0.737476674166813,1.12948698808508,0.391602314925481,0.686286847621712,0,0.647142602455851,0.74709290462411,1.21251028578504,4.99306318531491,1.81434175997808,4.21783273291921,0.306923946576125,3.64858122762996,4.35673107469383,6.14048698880044,6.11244900345709,0,0.154209693802656,1.06537035187876,0.410635780069046,2.07701771673448,1.62694529843943,0.120859449591622,6.21570057940183,6.16942625870505,1.95184561879831,1.27463817604702,2.75361271414791,1.80479845162965,0.693138033939733,1.56869953835371,0,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0.541892875087706,1.00337954770971,0,2.49322802678617,0.223874754722178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|phase1_expression=3.81524596468169,3.8538094300377,3.38290569830331,3.00219895059391,3.5756887554183,4.36169262050184,0,0.631719873426831,0.783556884599516,1.72013755551056,4.18680700783456,0.218441372130172,0.791300934685361,0.247532705920093,1.65698687863958,5.3786011716142,4.82155622419182,1.46062018077475,1.46379839637152,0,0.204000691244253,0.313454721478088,0.286235987131057,0.821246550437305,0,0.229240217243854,0.0821005894499457,0.314843125254717,0.786728553697808,1.15148819429164,1.39334510984468,0.919421224478927,0.30120591877825,3.32778609150109,0.0774672005803016,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0.223915474239924,0,0.257575567634187,2.76256653681173,1.88937971844405,1.94067248950253,7.67015821788759,7.81218987241469,9.91060386864331,20.4261598548727,21.2613386419154,25.5400808279672,7.58440497620561,10.973239620925,21.6682378550947,7.52969358170419,4.91231070104122,7.41587498668779,19.8954530041087,14.7627352455003,16.6227652707751,12.2044981069085,15.7576289521089,14.4916415181116,11.8985787837719,6.80862269629368,14.9477339758938,18.3411525637423,21.9022825736485,19.9813737128707,8.47559303686716,10.3117738076518,13.2914202725171,0.633765858935825,1.27562579979026,0.838634582033504,0.561643155732475,0.600707571366025,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,2.34894875748376,0,0,0,0,0.196709770113833,1.17903228824749,1.02800749499755,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,1.30361867064741,0,0.973269740605272,0,0.665188192387692,0.087834785693126,0,1.82147644146271,1.11235332835329,0.97364218096405,1.21890816109487,2.79211717089617,0.238490624305342,0.571994910780128,0,0,0,0,0,0,1.10047216776027,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0,0.732186172644509,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.732806975721629,0,0,1.3082821564276,1.98788780678127,1.2663051166458,0.397227542439656,0.573673241497627,1.77334191099179,0,2.1349799145941,0.98667019366864,0.311211035399766,0.67355336034844,0.163461903113459,0,0,0.937285727335186,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.826606249406124,0,3.21447008062124,0,3.59309070908119,0,0.125118519871964,0,0,1.5324389789951,1.50238058906597,0.113432183160021,0,0.85422955527427,0.635795703478686,0.300091096084402,1.23663035086127,0.772921620136887,1.11670113798954,0.337552664482532,0.68205903612839,0.252433774244115,0.644349290496095,0.646584227275248,0,1.0075209822764,0.169560592310488,0.193260853163297,1.36373060295417,0,0.121973706129595,0,0,0.310983165046111,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0.330881918197182,0,0.237270619111097,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0.514703430895577,0.878002283269004,2.24803506515239,0.402115889646523,0.555530670951178,0.977424915930974,2.07986957055916,0,0.34779121492523,0.234817388471643,0.721832238805369,0.925971025153221,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0,1.87467667973554,1.34385702559088,0.850650583454319,0.985143749731331,1.16253575405585,1.15014803749563,0,0.352193736052904,0.414656231081544,4.75595846275973,1.00993946741104,0.063497894292169,2.29193055334967,1.17217447210047,3.4214489204541,0.514137463516618,0.300343057843917,1.42913216315289,0,0,0.07333828582095,0.904902010304444,7.15312891703765,0.845302752556,0.797814349754612,4.16029747645464,0.257207374262142,0,0.532844358032199,0.285955987316295,0.542621605391443,4.11620168390384,0.325736184293735,0,1.58390374586686,1.20575750823834,1.74306691720059,1.49959486773086,1.2162378064119,0.502257091432126,0,1.19812427745791,1.14861935834114,0,0.723906533337896,0.410952645100767,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0,1.01637849688985,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,1.03985430765404,1.78428988797162,2.05013139544115,0.937131319941706,1.20378439891088,29.562975527278,4.1389228517002,0.664225598535437,0.737476674166813,1.12948698808508,0.391602314925481,0.686286847621712,0,0.647142602455851,0.74709290462411,1.21251028578504,4.99306318531491,1.81434175997808,4.21783273291921,0.306923946576125,3.64858122762996,4.35673107469383,6.14048698880044,6.11244900345709,0,0.154209693802656,1.06537035187876,0.410635780069046,2.07701771673448,1.62694529843943,0.120859449591622,6.21570057940183,6.16942625870505,1.95184561879831,1.27463817604702,2.75361271414791,1.80479845162965,0.693138033939733,1.56869953835371,0,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0.541892875087706,1.00337954770971,0,2.49322802678617,0.223874754722178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| ||
|short_description=p@chr6:36653561..36653579,+ | |short_description=p@chr6:36653561..36653579,+ | ||
}} | }} |
Latest revision as of 01:10, 31 July 2015
Short description: | p@chr6:36653561..36653579, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:36653561..36653579, + |
Coexpression cluster: | C672_CD14_Smooth_Mesenchymal_Placental_Fibroblast_mesenchymal_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-25 | 42 |
defensive cell | 4.07e-22 | 48 |
phagocyte | 4.07e-22 | 48 |
macrophage dendritic cell progenitor | 1.04e-17 | 61 |
monopoietic cell | 1.90e-17 | 59 |
monocyte | 1.90e-17 | 59 |
monoblast | 1.90e-17 | 59 |
promonocyte | 1.90e-17 | 59 |
granulocyte monocyte progenitor cell | 4.57e-17 | 67 |
myeloid lineage restricted progenitor cell | 2.42e-16 | 66 |
myeloid leukocyte | 1.11e-15 | 72 |
multi fate stem cell | 1.56e-10 | 427 |
somatic stem cell | 2.14e-10 | 433 |
stem cell | 1.26e-09 | 441 |
myeloid cell | 4.48e-09 | 108 |
common myeloid progenitor | 4.48e-09 | 108 |
connective tissue cell | 2.38e-08 | 361 |
mesenchymal cell | 2.59e-08 | 354 |
motile cell | 8.12e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.89e-15 | 167 |
bone marrow | 1.48e-14 | 76 |
skeletal element | 3.36e-14 | 90 |
skeletal system | 1.23e-13 | 100 |
bone element | 1.50e-13 | 82 |
immune system | 1.88e-10 | 93 |
mesoderm | 4.40e-09 | 315 |
mesoderm-derived structure | 4.40e-09 | 315 |
presumptive mesoderm | 4.40e-09 | 315 |
hematopoietic system | 1.31e-08 | 98 |
blood island | 1.31e-08 | 98 |
lateral plate mesoderm | 2.02e-08 | 203 |
connective tissue | 3.02e-08 | 371 |
omentum | 9.46e-08 | 6 |
peritoneum | 9.46e-08 | 6 |
abdominal cavity | 9.46e-08 | 6 |
visceral peritoneum | 9.46e-08 | 6 |
hemolymphoid system | 2.01e-07 | 108 |