FFCP PHASE1:Hg19::chr20:5093713..5093757,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29058 | |EntrezGene=29058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15876 | |HGNC=15876 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A57 | |UniProt=Q96A57 | ||
|association_with_transcript=0bp_to_ENST00000202834,ENST00000342308,NM_001009923,NM_001009924,NM_001009925,NM_014145,uc002wlk.2,uc002wll.2,uc002wlm.2,uc002wln.2,uc002wlo.2,uc010gbi.2_5end | |association_with_transcript=0bp_to_ENST00000202834,ENST00000342308,NM_001009923,NM_001009924,NM_001009925,NM_014145,uc002wlk.2,uc002wll.2,uc002wlm.2,uc002wln.2,uc002wlo.2,uc010gbi.2_5end | ||
|cluster_id=chr20:5093713..5093757,- | |||
|description=CAGE_peak_1_at_C20orf30_5end | |description=CAGE_peak_1_at_C20orf30_5end | ||
|id=chr20:5093713..5093757,- | |id=chr20:5093713..5093757,- | ||
|ontology_enrichment_celltype=CL:0000183!3.16e-09!59;CL:0000136!3.27e-09!15;CL:0000187!7.91e-09!54;CL:0000680!2.84e-08!57;CL:0000056!2.84e-08!57;CL:0000355!2.84e-08!57;CL:0000192!8.27e-08!42;CL:0000514!8.27e-08!42;CL:0000055!1.19e-07!180 | |ontology_enrichment_celltype=CL:0000183!3.16e-09!59;CL:0000136!3.27e-09!15;CL:0000187!7.91e-09!54;CL:0000680!2.84e-08!57;CL:0000056!2.84e-08!57;CL:0000355!2.84e-08!57;CL:0000192!8.27e-08!42;CL:0000514!8.27e-08!42;CL:0000055!1.19e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.92e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.27e-09,15;CL:0000187,1.03e-08,55;CL:0000680,3.59e-08,58;CL:0000056,3.59e-08,58;CL:0000355,3.59e-08,58;CL:0000192,1.12e-07,43;CL:0000514,1.12e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.59e-12!216;UBERON:0000490!1.51e-11!138;UBERON:0005256!3.12e-11!143;UBERON:0000475!4.42e-09!365;UBERON:0004290!5.39e-09!70;UBERON:0001134!9.95e-09!61;UBERON:0002036!9.95e-09!61;UBERON:0003082!9.95e-09!61;UBERON:0002385!1.20e-08!63;UBERON:0001015!1.20e-08!63;UBERON:0000383!1.20e-08!63;UBERON:0004458!1.23e-08!49;UBERON:0002323!7.51e-08!46;UBERON:0000914!1.44e-07!83;UBERON:0002329!1.44e-07!83;UBERON:0003077!1.44e-07!83;UBERON:0003059!1.44e-07!83;UBERON:0007282!1.44e-07!83;UBERON:0009618!1.44e-07!83;UBERON:0007285!1.44e-07!83;UBERON:0000486!2.09e-07!82;UBERON:0000119!2.20e-07!312;UBERON:0003104!2.73e-07!238;UBERON:0009142!2.73e-07!238;UBERON:0000466!5.35e-07!126;UBERON:0003914!7.09e-07!118;UBERON:0000483!7.48e-07!309;UBERON:0000481!9.48e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.75e-14,122;UBERON:0003104,1.07e-13,160;UBERON:0009142,1.07e-13,160;UBERON:0002100,9.45e-13,199;UBERON:0000490,5.72e-12,148;UBERON:0002329,6.62e-09,71;UBERON:0003059,6.62e-09,71;UBERON:0007282,6.62e-09,71;UBERON:0004290,6.62e-09,71;UBERON:0009618,6.62e-09,71;UBERON:0007503,1.04e-08,78;UBERON:0003077,1.20e-08,72;UBERON:0007285,1.20e-08,72;UBERON:0004458,1.23e-08,49;UBERON:0001134,1.25e-08,62;UBERON:0002036,1.25e-08,62;UBERON:0003082,1.25e-08,62;UBERON:0002385,1.50e-08,64;UBERON:0001015,1.50e-08,64;UBERON:0000383,1.50e-08,64;UBERON:0007524,2.63e-08,73;UBERON:0002323,7.51e-08,46;UBERON:0003886,1.01e-07,54;UBERON:0000486,2.39e-07,83;UBERON:0002553,6.36e-07,61;UBERON:0003914,6.55e-07,117 | |||
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| ||
|short_description=p1@C20orf30 | |short_description=p1@C20orf30 | ||
}} | }} |
Latest revision as of 00:31, 17 September 2015
Short description: | p1@C20orf30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C20orf30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000202834, ENST00000342308, NM_001009923, NM_001009924, NM_001009925, NM_014145, uc002wlk.2, uc002wll.2, uc002wlm.2, uc002wln.2, uc002wlo.2, uc010gbi.2_5end |
EntrezGene: | C20orf30 |
HGNC: | 15876 |
UniProt: | Q96A57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.27e-09 | 15 |
muscle cell | 1.03e-08 | 55 |
muscle precursor cell | 3.59e-08 | 58 |
myoblast | 3.59e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.59e-08 | 58 |
smooth muscle cell | 1.12e-07 | 43 |
smooth muscle myoblast | 1.12e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 6.75e-14 | 122 |
mesenchyme | 1.07e-13 | 160 |
entire embryonic mesenchyme | 1.07e-13 | 160 |
trunk | 9.45e-13 | 199 |
unilaminar epithelium | 5.72e-12 | 148 |
somite | 6.62e-09 | 71 |
presomitic mesoderm | 6.62e-09 | 71 |
presumptive segmental plate | 6.62e-09 | 71 |
dermomyotome | 6.62e-09 | 71 |
trunk paraxial mesoderm | 6.62e-09 | 71 |
epithelial vesicle | 1.04e-08 | 78 |
paraxial mesoderm | 1.20e-08 | 72 |
presumptive paraxial mesoderm | 1.20e-08 | 72 |
body cavity or lining | 1.23e-08 | 49 |
skeletal muscle tissue | 1.25e-08 | 62 |
striated muscle tissue | 1.25e-08 | 62 |
myotome | 1.25e-08 | 62 |
muscle tissue | 1.50e-08 | 64 |
musculature | 1.50e-08 | 64 |
musculature of body | 1.50e-08 | 64 |
dense mesenchyme tissue | 2.63e-08 | 73 |
body cavity | 7.51e-08 | 46 |
body cavity precursor | 1.01e-07 | 54 |
multilaminar epithelium | 2.39e-07 | 83 |
anatomical cavity | 6.36e-07 | 61 |
epithelial tube | 6.55e-07 | 117 |