FFCP PHASE1:Hg19::chr13:28712408..28712419,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:28712408..28712419,+
|short_description=p20@PAN3
|description=CAGE_peak_20_at_PAN3_5end
|association_with_transcript=-223bp_to_ENST00000380958,ENST0000050...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255967 | |EntrezGene=255967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29991 | |HGNC=29991 | ||
|TSSclassifier=strong | |||
|UniProt=Q58A45 | |UniProt=Q58A45 | ||
|association_with_transcript=-223bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end | |||
|cluster_id=chr13:28712408..28712419,+ | |||
|description=CAGE_peak_20_at_PAN3_5end | |||
|id=chr13:28712408..28712419,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.45e-12!182;CL:0000037!1.42e-11!172;CL:0000566!1.42e-11!172;CL:0002032!6.67e-10!165;CL:0000837!6.67e-10!165;CL:0000738!1.96e-09!140;CL:0000542!8.61e-07!53;CL:0000051!8.61e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.07e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.07e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;5.97e-34;1!UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0000996,7.06e-34,1;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0001781,1.32e-09,4;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,2.24702107184155,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.284567373393656,0,0,0.383010740264733,0,0,0,0.456469358066384,0,0,0,0.481764225311099,0.403599414382095,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,3.46991678005515,0.80057074828547,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0.257831551894309,0.299823467774787,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.258355639344024,0.372448285775147,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0,0,1.33151354837103,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,2.24702107184155,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.284567373393656,0,0,0.383010740264733,0,0,0,0.456469358066384,0,0,0,0.481764225311099,0.403599414382095,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,3.46991678005515,0.80057074828547,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0.257831551894309,0.299823467774787,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.258355639344024,0.372448285775147,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0,0,1.33151354837103,0.201273793591026,0 | ||
|short_description=p20@PAN3 | |||
}} | }} |
Latest revision as of 23:54, 16 September 2015
Short description: | p20@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PAN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -223bp_to_ENST00000380958, ENST00000503791, NM_175854, uc010tdo.1_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | Q58A45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
vagina | 7.06e-34 | 1 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
layer of retina | 1.32e-09 | 4 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |