FFCP PHASE1:Hg19::chr6:33037019..33037047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3113 | |EntrezGene=3113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4938 | |HGNC=4938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000437811_5end | |association_with_transcript=0bp_to_ENST00000437811_5end | ||
|cluster_id=chr6:33037019..33037047,- | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_5_at_HLA-DPA1_5end | |description=CAGE_peak_5_at_HLA-DPA1_5end | ||
|id=chr6:33037019..33037047,- | |id=chr6:33037019..33037047,- | ||
|ontology_enrichment_celltype=CL:0000738!2.54e-63!140;CL:0002087!2.60e-63!119;CL:0002031!7.60e-57!124;CL:0000037!1.85e-51!172;CL:0000566!1.85e-51!172;CL:0000988!9.03e-49!182;CL:0002032!3.71e-47!165;CL:0000837!3.71e-47!165;CL:0002009!3.22e-45!65;CL:0002194!6.29e-43!63;CL:0000576!6.29e-43!63;CL:0000040!6.29e-43!63;CL:0000559!6.29e-43!63;CL:0002057!2.81e-40!42;CL:0000557!1.82e-39!71;CL:0000839!1.89e-36!70;CL:0000860!2.10e-36!45;CL:0000766!9.27e-35!76;CL:0000763!1.77e-27!112;CL:0000049!1.77e-27!112;CL:0000542!1.24e-17!53;CL:0000051!1.24e-17!53;CL:0000945!2.83e-17!24;CL:0000826!2.83e-17!24;CL:0000838!3.99e-17!52;CL:0000134!1.06e-13!358;CL:0000451!3.67e-13!10;CL:0002320!9.11e-13!365;CL:0000236!1.71e-12!14;CL:0000990!2.40e-11!8;CL:0000219!1.39e-09!390;CL:0002393!3.42e-08!9;CL:0002397!3.42e-08!9;CL:0000840!5.90e-08!5;CL:0001029!5.90e-08!5;CL:0000048!1.21e-07!430;CL:0000453!2.79e-07!5;CL:0000723!4.07e-07!436;CL:0000034!9.81e-07!444 | |ontology_enrichment_celltype=CL:0000738!2.54e-63!140;CL:0002087!2.60e-63!119;CL:0002031!7.60e-57!124;CL:0000037!1.85e-51!172;CL:0000566!1.85e-51!172;CL:0000988!9.03e-49!182;CL:0002032!3.71e-47!165;CL:0000837!3.71e-47!165;CL:0002009!3.22e-45!65;CL:0002194!6.29e-43!63;CL:0000576!6.29e-43!63;CL:0000040!6.29e-43!63;CL:0000559!6.29e-43!63;CL:0002057!2.81e-40!42;CL:0000557!1.82e-39!71;CL:0000839!1.89e-36!70;CL:0000860!2.10e-36!45;CL:0000766!9.27e-35!76;CL:0000763!1.77e-27!112;CL:0000049!1.77e-27!112;CL:0000542!1.24e-17!53;CL:0000051!1.24e-17!53;CL:0000945!2.83e-17!24;CL:0000826!2.83e-17!24;CL:0000838!3.99e-17!52;CL:0000134!1.06e-13!358;CL:0000451!3.67e-13!10;CL:0002320!9.11e-13!365;CL:0000236!1.71e-12!14;CL:0000990!2.40e-11!8;CL:0000219!1.39e-09!390;CL:0002393!3.42e-08!9;CL:0002397!3.42e-08!9;CL:0000840!5.90e-08!5;CL:0001029!5.90e-08!5;CL:0000048!1.21e-07!430;CL:0000453!2.79e-07!5;CL:0000723!4.07e-07!436;CL:0000034!9.81e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.83e-61;39!CL:0000234;1.83e-61;39!CL:0000860;1.87e-61;33!CL:0002057;1.87e-61;33!CL:0000576;6.67e-53;48!CL:0000766;1.24e-34;69!CL:0000236;2.23e-24;13!CL:0000738;4.21e-23;136!CL:0000451;7.77e-23;10!CL:0002087;1.60e-22;104!CL:0000990;6.62e-19;8!CL:0000945;3.28e-16;24!CL:0000763;3.64e-16;100!CL:0000235;1.14e-14;6!CL:0000453;4.09e-14;5!CL:0000840;1.36e-11;5!CL:0000988;2.68e-11;177!CL:0000219;3.43e-10;193!CL:0000875;1.21e-08;3!CL:0002396;1.21e-08;3!CL:0002619;1.91e-07;3!CL:0002393;2.47e-07;6!CL:0002397;2.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.14e-101,61;CL:0002194,4.56e-96,59;CL:0000576,4.56e-96,59;CL:0000040,4.56e-96,59;CL:0000559,4.56e-96,59;CL:0000473,4.33e-94,48;CL:0000234,4.33e-94,48;CL:0000557,5.56e-91,67;CL:0000738,1.04e-86,136;CL:0000839,1.62e-84,66;CL:0002087,1.97e-83,115;CL:0000860,2.31e-80,42;CL:0002057,2.31e-80,42;CL:0002031,1.07e-79,120;CL:0000766,2.21e-76,72;CL:0000037,5.84e-69,168;CL:0000988,1.45e-64,177;CL:0002032,7.15e-64,161;CL:0000837,7.15e-64,161;CL:0000763,4.25e-61,108;CL:0000049,4.25e-61,108;CL:0000236,3.26e-26,14;CL:0000134,2.47e-24,354;CL:0002320,1.64e-23,361;CL:0000451,6.69e-23,10;CL:0000219,1.28e-20,386;CL:0000990,6.99e-19,8;CL:0000048,4.36e-17,427;CL:0000723,1.34e-16,433;CL:0000945,2.87e-16,24;CL:0000826,2.87e-16,24;CL:0000034,5.70e-16,441;CL:0000235,1.38e-14,6;CL:0000453,4.07e-14,5;CL:0002393,9.62e-14,9;CL:0002397,9.62e-14,9;CL:0000840,1.37e-11,5;CL:0001029,1.37e-11,5;CL:0000875,1.25e-08,3;CL:0002396,1.25e-08,3;CL:0002619,1.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.20e-58;42!CL:0000049;1.18e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.96e-43!102;UBERON:0003061!4.96e-43!102;UBERON:0002193!2.12e-40!112;UBERON:0002371!4.27e-35!80;UBERON:0001474!4.61e-31!86;UBERON:0002405!1.17e-29!115;UBERON:0004765!3.46e-24!101;UBERON:0001434!3.46e-24!101;UBERON:0003081!3.60e-12!216;UBERON:0002384!6.95e-12!375;UBERON:0007023!4.86e-11!115;UBERON:0002204!5.35e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-78,76;UBERON:0001474,7.52e-72,82;UBERON:0002390,9.44e-71,98;UBERON:0003061,9.44e-71,98;UBERON:0002193,3.22e-65,108;UBERON:0002405,3.03e-64,93;UBERON:0004765,3.13e-64,90;UBERON:0001434,2.09e-56,100;UBERON:0003081,9.29e-29,203;UBERON:0002204,4.13e-28,167;UBERON:0002384,2.16e-22,371;UBERON:0000926,3.63e-13,315;UBERON:0004120,3.63e-13,315;UBERON:0006603,3.63e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.916960868975415,0.985207073399349,0.550975469195755,0.786728553697808,0,0.619264493264304,0,0,0,0.46480320348181,0.284338464974843,0.587200878669695,0,0.401088894940283,1.51907609501096,2.01523926815932,1.94336199611388,1.80302897343931,1.74477886535478,1.88937971844405,1.4555043671269,3.48643555358527,2.46700732813095,2.47765096716083,4.31538588483226,4.09857130446561,5.43909128743746,1.37898272294647,1.93645405075148,4.06279459783025,1.88242339542605,3.547779950752,3.37085226667627,3.97909060082173,3.20929027076094,1.91801137739712,2.30895910130701,8.97586459297343,3.40979800426155,2.90209238628584,1.13477044938228,3.73693349397345,1.25624332628372,3.12889751052121,1.95469960234605,2.42159801053347,2.20966581592539,4.1140110367315,13.0978277513404,9.99240209835705,6.49941801075965,2.3589012540764,1.20141514273205,0.803627933485401,3.13514018115373,5.9675003159727,3.65328307529268,1.75996244461323,3.27683166757279,3.55803701545422,2.98711155796555,2.40237592221607,1.14950487990897,3.96626923670917,1.90810750907073,2.27685187643779,9.39579502993502,2.29363936875137,0,0,0.263384084775077,0,0,0.616804496998528,0,0,0,0,0.557052284425868,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,5.8418530857843,4.00498395788315,14.8912915781129,0.953962497221368,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,3.69325509131096,1.17002132569619,3.56714789492948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,3.01999881146064,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0.952927101831156,1.23408681925858,0,0.540031437238115,3.17250070517708,0,0,0,0.371606350251437,0,0,0,0,0,0,0,1.40398589056729,0.228234679033192,0,0,0,0,0.605399121573143,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.891547074219827,0.284136146806413,0,0.296964680832639,0,0,0.281338832821026,0,0.329607748453519,0,0.796991953004279,0.552567831062295,0,0,0.615424027305347,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0.617819694732514,0.522109747527277,0.067401132980677,0,0,1.094728735294,0,0,0,0,0,0.568679216656392,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0.137041924646751,0,0.126621591911757,0,0,1.92107695265417,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0.408610218334727,0,0.137539436597234,0,4.94942561413301,11.6070293183692,0,0,0.394028536495991,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.747511887973863,0,0.828478110694391,1.48849806543585,0.197611631897944,0.730755590285376,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0.573409195690071,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,6.24464749472807,9.15966207832728,0,0,0,1.39991177098451,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.49804183822513,0,0.271878931907327,0,0,0,0.470958557103084,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0.196300467230486,0,0,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0,0,0.588925401344836,0.891139200981258,0,0,0.281951753939561,0.45120521581504,0.199882311849858,0,0,0,0,0.917458566809082,0.716697915757256,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0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| ||
|short_description=p5@HLA-DPA1 | |short_description=p5@HLA-DPA1 | ||
}} | }} |
Latest revision as of 05:27, 18 September 2015
Short description: | p5@HLA-DPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HLA-DPA1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 0bp_to_ENST00000437811_5end |
EntrezGene: | HLA-DPA1 |
HGNC: | 4938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-78 | 76 |
bone element | 7.52e-72 | 82 |
hematopoietic system | 9.44e-71 | 98 |
blood island | 9.44e-71 | 98 |
hemolymphoid system | 3.22e-65 | 108 |
immune system | 3.03e-64 | 93 |
skeletal element | 3.13e-64 | 90 |
skeletal system | 2.09e-56 | 100 |
lateral plate mesoderm | 9.29e-29 | 203 |
musculoskeletal system | 4.13e-28 | 167 |
connective tissue | 2.16e-22 | 371 |
mesoderm | 3.63e-13 | 315 |
mesoderm-derived structure | 3.63e-13 | 315 |
presumptive mesoderm | 3.63e-13 | 315 |