FFCP PHASE1:Hg19::chr6:31785644..31785664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31785644..31785664,+ | |||
|coexpression_cluster_id=C4593 | |||
|description=CAGE_peak_at_chr6:31785644..31785664,+ | |description=CAGE_peak_at_chr6:31785644..31785664,+ | ||
|id=chr6:31785644..31785664,+ | |id=chr6:31785644..31785664,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.05e-12!42;CL:0000860!2.06e-11!45;CL:0000557!1.13e-10!71;CL:0000839!5.65e-10!70;CL:0002009!4.52e-09!65;CL:0002194!1.21e-08!63;CL:0000576!1.21e-08!63;CL:0000040!1.21e-08!63;CL:0000559!1.21e-08!63;CL:0000766!1.38e-08!76 | |ontology_enrichment_celltype=CL:0002057!1.05e-12!42;CL:0000860!2.06e-11!45;CL:0000557!1.13e-10!71;CL:0000839!5.65e-10!70;CL:0002009!4.52e-09!65;CL:0002194!1.21e-08!63;CL:0000576!1.21e-08!63;CL:0000040!1.21e-08!63;CL:0000559!1.21e-08!63;CL:0000766!1.38e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.67e-17;5!CL:0000860;7.99e-16;33!CL:0002057;7.99e-16;33!CL:0000473;2.13e-11;39!CL:0000234;2.13e-11;39!CL:0000163;7.41e-10;9!CL:0000766;1.80e-08;69!CL:0000576;5.85e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.97e-17,5;CL:0002028,1.97e-17,5;CL:0000839,1.04e-14,66;CL:0000557,1.81e-14,67;CL:0000766,2.32e-13,72;CL:0000860,8.97e-13,42;CL:0002057,8.97e-13,42;CL:0000473,4.71e-11,48;CL:0000234,4.71e-11,48;CL:0000163,6.29e-10,9;CL:0002194,1.21e-08,59;CL:0000576,1.21e-08,59;CL:0000040,1.21e-08,59;CL:0000559,1.21e-08,59;CL:0000763,2.25e-08,108;CL:0000049,2.25e-08,108;CL:0002009,2.48e-08,61;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-17!115;UBERON:0000062!1.77e-10!511;UBERON:0001049!5.49e-10!57;UBERON:0005068!5.49e-10!57;UBERON:0006241!5.49e-10!57;UBERON:0007135!5.49e-10!57;UBERON:0002405!1.03e-08!115;UBERON:0002371!1.40e-08!80;UBERON:0002390!3.42e-08!102;UBERON:0003061!3.42e-08!102;UBERON:0001474!3.57e-08!86;UBERON:0002193!7.26e-08!112;UBERON:0004765!1.28e-07!101;UBERON:0001434!1.28e-07!101;UBERON:0002616!1.81e-07!59;UBERON:0003080!3.14e-07!42;UBERON:0000955!3.30e-07!69;UBERON:0006238!3.30e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.73e-11;1!UBERON:0005208;6.73e-11;1!UBERON:0004145;6.73e-11;1!UBERON:0005946;6.73e-11;1!UBERON:0005965;6.73e-11;1!UBERON:0002078;6.73e-11;1!UBERON:0000996;8.53e-11;1!UBERON:0002038;1.19e-10;1!UBERON:0009661;1.19e-10;1!UBERON:0002950;1.19e-10;1!UBERON:0001891;1.19e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-12,76;UBERON:0001474,1.53e-11,82;UBERON:0002134,6.73e-11,1;UBERON:0005208,6.73e-11,1;UBERON:0005946,6.73e-11,1;UBERON:0005965,6.73e-11,1;UBERON:0002078,6.73e-11,1;UBERON:0000996,8.14e-11,1;UBERON:0002038,1.19e-10,1;UBERON:0009661,1.19e-10,1;UBERON:0002950,1.19e-10,1;UBERON:0001891,1.19e-10,1;UBERON:0009616,1.19e-10,1;UBERON:0010286,1.19e-10,1;UBERON:0004765,2.25e-10,90;UBERON:0002405,5.47e-10,93;UBERON:0002390,2.14e-09,98;UBERON:0003061,2.14e-09,98;UBERON:0001434,3.55e-09,100;UBERON:0002193,2.25e-08,108 | |||
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| ||
|short_description=p@chr6:31785644..31785664,+ | |short_description=p@chr6:31785644..31785664,+ | ||
}} | }} |
Latest revision as of 00:10, 31 July 2015
Short description: | p@chr6:31785644..31785664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31785644..31785664, + |
Coexpression cluster: | C4593_Mast_heart_vagina_aorta_peripheral_substantia_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.97e-17 | 5 |
basophil mast progenitor cell | 1.97e-17 | 5 |
myeloid lineage restricted progenitor cell | 1.04e-14 | 66 |
granulocyte monocyte progenitor cell | 1.81e-14 | 67 |
myeloid leukocyte | 2.32e-13 | 72 |
classical monocyte | 8.97e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.97e-13 | 42 |
defensive cell | 4.71e-11 | 48 |
phagocyte | 4.71e-11 | 48 |
endocrine cell | 6.29e-10 | 9 |
monopoietic cell | 1.21e-08 | 59 |
monocyte | 1.21e-08 | 59 |
monoblast | 1.21e-08 | 59 |
promonocyte | 1.21e-08 | 59 |
myeloid cell | 2.25e-08 | 108 |
common myeloid progenitor | 2.25e-08 | 108 |
macrophage dendritic cell progenitor | 2.48e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-12 | 76 |
bone element | 1.53e-11 | 82 |
tricuspid valve | 6.73e-11 | 1 |
right atrium valve | 6.73e-11 | 1 |
outflow tract of atrium | 6.73e-11 | 1 |
outflow part of right atrium | 6.73e-11 | 1 |
right cardiac atrium | 6.73e-11 | 1 |
vagina | 8.14e-11 | 1 |
substantia nigra | 1.19e-10 | 1 |
midbrain nucleus | 1.19e-10 | 1 |
regional part of midbrain | 1.19e-10 | 1 |
midbrain | 1.19e-10 | 1 |
presumptive midbrain | 1.19e-10 | 1 |
midbrain neural tube | 1.19e-10 | 1 |
skeletal element | 2.25e-10 | 90 |
immune system | 5.47e-10 | 93 |
hematopoietic system | 2.14e-09 | 98 |
blood island | 2.14e-09 | 98 |
skeletal system | 3.55e-09 | 100 |
hemolymphoid system | 2.25e-08 | 108 |