FFCP PHASE1:Hg19::chr13:24844985..24844994,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:24844985..24844994,+
|short_description=p12@SPATA13
|description=CAGE_peak_12_at_SPATA13_5end
|association_with_transcript=6bp_to_ENST00000454083_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221178 | |EntrezGene=221178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23222 | |HGNC=23222 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VX67 | |UniProt=Q5VX67 | ||
|association_with_transcript=6bp_to_ENST00000454083_5end | |||
|cluster_id=chr13:24844985..24844994,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_12_at_SPATA13_5end | |||
|id=chr13:24844985..24844994,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.36e-55!76;CL:0002057!5.19e-54!42;CL:0000860!2.18e-49!45;CL:0000839!7.58e-47!70;CL:0000557!5.98e-46!71;CL:0000738!5.11e-42!140;CL:0002009!5.30e-41!65;CL:0002194!6.56e-41!63;CL:0000576!6.56e-41!63;CL:0000040!6.56e-41!63;CL:0000559!6.56e-41!63;CL:0000763!3.38e-35!112;CL:0000049!3.38e-35!112;CL:0002031!7.11e-33!124;CL:0000037!8.61e-31!172;CL:0000566!8.61e-31!172;CL:0000988!8.55e-30!182;CL:0002087!9.40e-30!119;CL:0002032!2.04e-28!165;CL:0000837!2.04e-28!165;CL:0002393!3.18e-10!9;CL:0002397!3.18e-10!9;CL:0000094!1.10e-09!8;CL:0002274!1.64e-07!5;CL:0000457!1.64e-07!5;CL:0002191!1.64e-07!5;CL:0000097!1.64e-07!5;CL:0000831!1.64e-07!5;CL:0002028!1.64e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-80;33!CL:0002057;1.89e-80;33!CL:0000473;9.63e-54;39!CL:0000234;9.63e-54;39!CL:0000576;2.80e-45;48!CL:0000766;2.71e-36;69!CL:0000094;5.52e-15;8!CL:0000775;6.24e-15;3!CL:0000763;1.50e-14;100!CL:0002087;5.26e-12;104!CL:0000081;7.87e-11;11!CL:0000738;3.04e-09;136!CL:0000875;3.88e-07;3!CL:0002396;3.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.67e-84,42;CL:0002057,2.67e-84,42;CL:0000473,5.53e-73,48;CL:0000234,5.53e-73,48;CL:0000766,4.19e-70,72;CL:0002194,3.89e-57,59;CL:0000576,3.89e-57,59;CL:0000040,3.89e-57,59;CL:0000559,3.89e-57,59;CL:0002009,4.32e-55,61;CL:0000839,1.45e-54,66;CL:0000557,1.15e-53,67;CL:0000763,1.29e-44,108;CL:0000049,1.29e-44,108;CL:0000738,1.17e-38,136;CL:0000037,6.02e-30,168;CL:0002087,1.22e-28,115;CL:0000988,4.64e-28,177;CL:0002032,1.11e-27,161;CL:0000837,1.11e-27,161;CL:0002031,2.48e-27,120;CL:0000775,2.16e-15,3;CL:0000094,2.56e-15,8;CL:0000134,3.22e-11,354;CL:0000081,4.55e-11,11;CL:0002320,7.46e-11,361;CL:0000219,1.44e-09,386;CL:0000048,5.37e-08,427;CL:0000723,8.85e-08,433;CL:0000034,1.69e-07,441;CL:0000875,4.01e-07,3;CL:0002396,4.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.83e-59;42!CL:0000049;4.39e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-51!102;UBERON:0003061!2.51e-51!102;UBERON:0002193!9.70e-45!112;UBERON:0002371!5.18e-42!80;UBERON:0001474!8.23e-38!86;UBERON:0002405!8.06e-30!115;UBERON:0004765!1.56e-29!101;UBERON:0001434!1.56e-29!101;UBERON:0003081!3.72e-17!216;UBERON:0002204!3.45e-13!167;UBERON:0007023!1.06e-12!115;UBERON:0002308!6.79e-09!9;UBERON:0000125!6.79e-09!9;UBERON:0002298!1.50e-07!8;UBERON:0001049!3.09e-07!57;UBERON:0005068!3.09e-07!57;UBERON:0006241!3.09e-07!57;UBERON:0007135!3.09e-07!57;UBERON:0009663!9.16e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-46,76;UBERON:0002390,2.18e-46,98;UBERON:0003061,2.18e-46,98;UBERON:0002405,6.08e-43,93;UBERON:0001474,8.37e-43,82;UBERON:0002193,1.72e-41,108;UBERON:0004765,1.79e-38,90;UBERON:0001434,5.04e-34,100;UBERON:0003081,6.90e-19,203;UBERON:0002204,7.05e-18,167;UBERON:0002384,2.35e-10,371;UBERON:0000926,1.09e-09,315;UBERON:0004120,1.09e-09,315;UBERON:0006603,1.09e-09,315;UBERON:0002106,2.19e-07,3;UBERON:0004854,2.19e-07,3;UBERON:0009034,2.19e-07,3;UBERON:0002095,2.19e-07,3;UBERON:0004782,2.19e-07,3;UBERON:0003281,2.19e-07,3;UBERON:0009664,2.19e-07,3;UBERON:0002296,2.19e-07,3;UBERON:0005602,2.19e-07,3;UBERON:0001179,2.19e-07,3;UBERON:0006293,2.19e-07,3 | |||
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| ||
|short_description=p12@SPATA13 | |||
}} | }} |
Latest revision as of 21:26, 16 September 2015
Short description: | p12@SPATA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPATA13_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 6bp_to_ENST00000454083_5end |
EntrezGene: | SPATA13 |
HGNC: | 23222 |
UniProt: | Q5VX67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-46 | 76 |
hematopoietic system | 2.18e-46 | 98 |
blood island | 2.18e-46 | 98 |
immune system | 6.08e-43 | 93 |
bone element | 8.37e-43 | 82 |
hemolymphoid system | 1.72e-41 | 108 |
skeletal element | 1.79e-38 | 90 |
skeletal system | 5.04e-34 | 100 |
lateral plate mesoderm | 6.90e-19 | 203 |
musculoskeletal system | 7.05e-18 | 167 |
connective tissue | 2.35e-10 | 371 |
mesoderm | 1.09e-09 | 315 |
mesoderm-derived structure | 1.09e-09 | 315 |
presumptive mesoderm | 1.09e-09 | 315 |
spleen | 2.19e-07 | 3 |
gastrointestinal system mesentery | 2.19e-07 | 3 |
stomach region | 2.19e-07 | 3 |
mesentery | 2.19e-07 | 3 |
gastrointestinal system serosa | 2.19e-07 | 3 |
mesentery of stomach | 2.19e-07 | 3 |
gut mesentery | 2.19e-07 | 3 |
dorsal mesentery | 2.19e-07 | 3 |
dorsal mesogastrium | 2.19e-07 | 3 |
peritoneal cavity | 2.19e-07 | 3 |
spleen primordium | 2.19e-07 | 3 |