FFCP PHASE1:Hg19::chr20:43990576..43990596,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90196 | |EntrezGene=90196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16162 | |HGNC=16162 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2H4,E7ETM6 | |UniProt=Q8N2H4,E7ETM6 | ||
|association_with_transcript=0bp_to_ENST00000372727,ENST00000414310,NM_001197129_5end | |association_with_transcript=0bp_to_ENST00000372727,ENST00000414310,NM_001197129_5end | ||
|cluster_id=chr20:43990576..43990596,+ | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_4_at_SYS1_5end | |description=CAGE_peak_4_at_SYS1_5end | ||
|id=chr20:43990576..43990596,+ | |id=chr20:43990576..43990596,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.48e-42!112;CL:0000049!1.48e-42!112;CL:0000557!5.14e-40!71;CL:0002009!2.74e-38!65;CL:0000839!3.02e-36!70;CL:0002194!3.36e-35!63;CL:0000576!3.36e-35!63;CL:0000040!3.36e-35!63;CL:0000559!3.36e-35!63;CL:0000766!3.16e-34!76;CL:0000037!2.29e-26!172;CL:0000566!2.29e-26!172;CL:0002032!1.09e-24!165;CL:0000837!1.09e-24!165;CL:0000988!5.49e-24!182;CL:0000738!5.88e-19!140;CL:0002031!1.37e-18!124;CL:0002057!3.43e-17!42;CL:0002087!2.26e-16!119;CL:0000860!1.28e-15!45;CL:0000840!3.34e-09!5;CL:0001029!3.34e-09!5;CL:0000990!4.58e-08!8;CL:0000235!5.57e-08!10;CL:0002619!1.01e-07!3 | |ontology_enrichment_celltype=CL:0000763!1.48e-42!112;CL:0000049!1.48e-42!112;CL:0000557!5.14e-40!71;CL:0002009!2.74e-38!65;CL:0000839!3.02e-36!70;CL:0002194!3.36e-35!63;CL:0000576!3.36e-35!63;CL:0000040!3.36e-35!63;CL:0000559!3.36e-35!63;CL:0000766!3.16e-34!76;CL:0000037!2.29e-26!172;CL:0000566!2.29e-26!172;CL:0002032!1.09e-24!165;CL:0000837!1.09e-24!165;CL:0000988!5.49e-24!182;CL:0000738!5.88e-19!140;CL:0002031!1.37e-18!124;CL:0002057!3.43e-17!42;CL:0002087!2.26e-16!119;CL:0000860!1.28e-15!45;CL:0000840!3.34e-09!5;CL:0001029!3.34e-09!5;CL:0000990!4.58e-08!8;CL:0000235!5.57e-08!10;CL:0002619!1.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.49e-43;6!CL:0000473;3.47e-22;39!CL:0000234;3.47e-22;39!CL:0002619;4.67e-22;3!CL:0000840;8.84e-19;5!CL:0000576;7.18e-16;48!CL:0000766;4.17e-14;69!CL:0000763;1.33e-12;100!CL:0000990;1.38e-12;8!CL:0000451;2.52e-10;10!CL:0000860;5.81e-08;33!CL:0002057;5.81e-08;33!CL:0000738;2.21e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,8.36e-55,61;CL:0002194,1.15e-51,59;CL:0000576,1.15e-51,59;CL:0000040,1.15e-51,59;CL:0000559,1.15e-51,59;CL:0000557,1.32e-49,67;CL:0000839,7.56e-46,66;CL:0000235,3.63e-43,6;CL:0000763,8.68e-42,108;CL:0000049,8.68e-42,108;CL:0000766,9.51e-42,72;CL:0002032,1.22e-26,161;CL:0000837,1.22e-26,161;CL:0002031,4.83e-26,120;CL:0000037,2.39e-25,168;CL:0002087,9.34e-25,115;CL:0000988,7.81e-24,177;CL:0000738,1.67e-22,136;CL:0002619,4.68e-22,3;CL:0000473,6.88e-22,48;CL:0000234,6.88e-22,48;CL:0000840,1.25e-18,5;CL:0001029,1.25e-18,5;CL:0000990,1.73e-12,8;CL:0000451,3.02e-10,10;CL:0000134,1.39e-09,354;CL:0002320,2.64e-09,361;CL:0000219,2.56e-08,386;CL:0000048,4.16e-07,427;CL:0000860,5.60e-07,42;CL:0002057,5.60e-07,42;CL:0000723,6.12e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000049;9.67e-16;108!UBERON:0005425;4.72e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!2.84e-11!31;DOID:1240!3.66e-08!39 | |ontology_enrichment_disease=DOID:8692!2.84e-11!31;DOID:1240!3.66e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.67e-09;31!DOID:1240;4.21e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.15e-10,31;DOID:1240,7.26e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.43e-36!80;UBERON:0001474!1.43e-32!86;UBERON:0002390!2.51e-31!102;UBERON:0003061!2.51e-31!102;UBERON:0002193!7.77e-29!112;UBERON:0002405!2.37e-26!115;UBERON:0004765!8.08e-26!101;UBERON:0001434!8.08e-26!101;UBERON:0002204!2.99e-12!167;UBERON:0003081!7.94e-12!216;UBERON:0007023!5.39e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.59e-08;1!UBERON:0006518;2.59e-08;1!UBERON:0008949;2.59e-08;1!UBERON:0000101;2.59e-08;1!UBERON:0002167;2.59e-08;1!UBERON:0000941;4.72e-08;1!UBERON:0001785;4.72e-08;1!UBERON:0002464;4.72e-08;1!UBERON:0004904;4.72e-08;1!UBERON:0001021;4.72e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-43,76;UBERON:0001474,6.83e-40,82;UBERON:0004765,5.11e-36,90;UBERON:0002405,9.81e-35,93;UBERON:0002390,9.08e-33,98;UBERON:0003061,9.08e-33,98;UBERON:0001434,4.90e-32,100;UBERON:0002193,2.24e-29,108;UBERON:0002204,1.47e-17,167;UBERON:0003081,1.08e-13,203;UBERON:0002384,6.36e-09,371;UBERON:0002171,2.33e-08,1;UBERON:0006518,2.33e-08,1;UBERON:0008949,2.33e-08,1;UBERON:0000101,2.33e-08,1;UBERON:0002167,2.33e-08,1;UBERON:0000941,4.72e-08,1;UBERON:0001785,4.72e-08,1;UBERON:0002464,4.72e-08,1;UBERON:0004904,4.72e-08,1;UBERON:0001021,4.72e-08,1;UBERON:0003902,4.72e-08,1;UBERON:0005425,4.72e-08,1;UBERON:0000926,2.76e-07,315;UBERON:0004120,2.76e-07,315;UBERON:0006603,2.76e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,5.59788685599811,4.85840499028469,3.34848237924443,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,1.43846196161075,1.2808035326455,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,1.31940520074686,1.39624560335142,0.426224750532694,0,0,0,1.25624332628372,1.5644487552606,1.08594422352558,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.27183175558278,1.21890816109487,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0495013226321,5.38209809820247,9.36376322418988,0,0,0,0,0,0,0,0.352193736052904,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,11.5519131029389,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93116049358842,0,0.156679895773023,2.50634477090067,0.169291777801603,0,0,0.425846237690326,1.71752672377882,1.84344458585075,2.46043718681657,1.50164227540718,0.19538809540204,0,0,1.6227340708559,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,3.0952078182318,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.854299300541557,0,2.89967338743037,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.31037357147929,0,0.12729431655633,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,5.59788685599811,4.85840499028469,3.34848237924443,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,1.43846196161075,1.2808035326455,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,1.31940520074686,1.39624560335142,0.426224750532694,0,0,0,1.25624332628372,1.5644487552606,1.08594422352558,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.27183175558278,1.21890816109487,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0495013226321,5.38209809820247,9.36376322418988,0,0,0,0,0,0,0,0.352193736052904,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,11.5519131029389,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93116049358842,0,0.156679895773023,2.50634477090067,0.169291777801603,0,0,0.425846237690326,1.71752672377882,1.84344458585075,2.46043718681657,1.50164227540718,0.19538809540204,0,0,1.6227340708559,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,3.0952078182318,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.854299300541557,0,2.89967338743037,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.31037357147929,0,0.12729431655633,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p4@SYS1 | |short_description=p4@SYS1 | ||
}} | }} |
Latest revision as of 11:17, 16 September 2015
Short description: | p4@SYS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYS1_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 0bp_to_ENST00000372727, ENST00000414310, NM_001197129_5end |
EntrezGene: | SYS1 |
HGNC: | 16162 |
UniProt: | Q8N2H4E7ETM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-43 | 76 |
bone element | 6.83e-40 | 82 |
skeletal element | 5.11e-36 | 90 |
immune system | 9.81e-35 | 93 |
hematopoietic system | 9.08e-33 | 98 |
blood island | 9.08e-33 | 98 |
skeletal system | 4.90e-32 | 100 |
hemolymphoid system | 2.24e-29 | 108 |
musculoskeletal system | 1.47e-17 | 167 |
lateral plate mesoderm | 1.08e-13 | 203 |
connective tissue | 6.36e-09 | 371 |
lower lobe of right lung | 2.33e-08 | 1 |
right lung lobe | 2.33e-08 | 1 |
lower lobe of lung | 2.33e-08 | 1 |
lobe of lung | 2.33e-08 | 1 |
right lung | 2.33e-08 | 1 |
cranial nerve II | 4.72e-08 | 1 |
cranial nerve | 4.72e-08 | 1 |
nerve trunk | 4.72e-08 | 1 |
nerve connecting eye with brain | 4.72e-08 | 1 |
nerve | 4.72e-08 | 1 |
retinal neural layer | 4.72e-08 | 1 |
presumptive neural retina | 4.72e-08 | 1 |
mesoderm | 2.76e-07 | 315 |
mesoderm-derived structure | 2.76e-07 | 315 |
presumptive mesoderm | 2.76e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.15e-10 | 31 |
leukemia | 7.26e-08 | 39 |