FFCP PHASE1:Hg19::chr13:20762566..20762577,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:20762566..20762577,-
|short_description=p@chr13:20762566..20762577,-
|description=CAGE_peak_at_chr13:20762566..20762577,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:20762566..20762577,- | |||
|coexpression_cluster_id=C1702 | |||
|description=CAGE_peak_at_chr13:20762566..20762577,- | |||
|id=chr13:20762566..20762577,- | |||
|ontology_enrichment_celltype=CL:0002076!7.66e-20!43;CL:0002368!1.07e-15!13;CL:0000223!5.15e-13!59;CL:0002159!9.98e-13!13;CL:0000244!1.13e-12!4;CL:0000731!1.13e-12!4;CL:0002057!2.89e-09!42;CL:0002166!6.92e-09!3;CL:0002231!1.42e-08!3;CL:0000860!1.97e-08!45;CL:0000066!7.41e-08!254;CL:0002202!1.91e-07!9;CL:0002632!1.91e-07!9;CL:0000575!4.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000244;4.89e-41;4!CL:0000731;4.89e-41;4!CL:0000575;5.46e-21;2!CL:0002159;1.39e-11;14!CL:0002336;3.45e-11;1!CL:0002261;3.45e-11;1!CL:0002170;3.45e-11;1!CL:0002368;1.88e-07;13!CL:0002076;5.27e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.79e-41,4;CL:0000731,2.79e-41,4;CL:0000575,2.83e-21,2;CL:0002159,1.10e-11,14;CL:0002336,6.00e-11,1;CL:0002261,6.00e-11,1;CL:0002170,6.00e-11,1;CL:0002076,3.89e-08,42;CL:0002368,1.92e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!4.09e-10!5;UBERON:0005910!2.09e-08!6;UBERON:0001708!9.56e-07!4;UBERON:0001704!9.56e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;6.50e-33;5!UBERON:0005910;1.72e-27;6!UBERON:0001723;2.50e-14;3!UBERON:0001033;2.50e-14;3!UBERON:0000486;6.89e-14;12!UBERON:0005795;3.45e-11;1!UBERON:0000964;5.58e-11;4!UBERON:0010409;5.58e-11;4!UBERON:0000020;3.53e-07;23!UBERON:0001032;6.93e-07;24!UBERON:0004456;6.93e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.16e-33,5;UBERON:0005910,1.19e-27,6;UBERON:0001723,2.59e-14,3;UBERON:0001033,2.59e-14,3;UBERON:0010056,2.59e-14,3;UBERON:0000964,4.02e-11,4;UBERON:0010409,4.02e-11,4;UBERON:0004348,4.02e-11,4;UBERON:0005427,4.02e-11,4;UBERON:0000033,4.70e-08,56;UBERON:0000153,3.32e-07,62;UBERON:0007811,3.32e-07,62;UBERON:0004119,3.80e-07,160;UBERON:0000925,3.80e-07,160;UBERON:0006595,3.80e-07,160;UBERON:0003102,5.69e-07,99;UBERON:0001444,6.12e-07,49;UBERON:0000020,6.31e-07,24;UBERON:0001032,6.31e-07,24;UBERON:0004456,6.31e-07,24 | |||
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| ||
|short_description=p@chr13:20762566..20762577,- | |||
}} | }} |
Latest revision as of 14:58, 24 July 2015
Short description: | p@chr13:20762566..20762577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:20762566..20762577, - |
Coexpression cluster: | C1702_Urothelial_Bronchial_Corneal_Sebocyte_Tracheal_Esophageal_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.79e-41 | 4 |
urothelial cell | 2.79e-41 | 4 |
corneal epithelial cell | 2.83e-21 | 2 |
general ecto-epithelial cell | 1.10e-11 | 14 |
buccal mucosa cell | 6.00e-11 | 1 |
endothelial cell of viscerocranial mucosa | 6.00e-11 | 1 |
keratinized cell of the oral mucosa | 6.00e-11 | 1 |
endo-epithelial cell | 3.89e-08 | 42 |
respiratory epithelial cell | 1.92e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.16e-33 | 5 |
transitional epithelium | 1.19e-27 | 6 |
tongue | 2.59e-14 | 3 |
gustatory system | 2.59e-14 | 3 |
future tongue | 2.59e-14 | 3 |
cornea | 4.02e-11 | 4 |
eye surface | 4.02e-11 | 4 |
optic eminence | 4.02e-11 | 4 |
corneal primordium | 4.02e-11 | 4 |
head | 4.70e-08 | 56 |
anterior region of body | 3.32e-07 | 62 |
craniocervical region | 3.32e-07 | 62 |
endoderm-derived structure | 3.80e-07 | 160 |
endoderm | 3.80e-07 | 160 |
presumptive endoderm | 3.80e-07 | 160 |
surface structure | 5.69e-07 | 99 |
subdivision of head | 6.12e-07 | 49 |
sense organ | 6.31e-07 | 24 |
sensory system | 6.31e-07 | 24 |
entire sense organ system | 6.31e-07 | 24 |