FFCP PHASE1:Hg19::chr20:35176474..35176493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35176474..35176493,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35176474..35176493,+ | |description=CAGE_peak_at_chr20:35176474..35176493,+ | ||
|id=chr20:35176474..35176493,+ | |id=chr20:35176474..35176493,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.12e-16!180;CL:0000192!2.35e-11!42;CL:0000514!2.35e-11!42;CL:0000183!4.91e-11!59;CL:0000680!1.34e-10!57;CL:0000056!1.34e-10!57;CL:0000355!1.34e-10!57;CL:0000187!1.04e-09!54;CL:0000057!1.91e-09!75;CL:0000393!8.52e-09!60;CL:0000211!8.52e-09!60;CL:0000136!5.85e-08!15;CL:0000359!9.80e-08!32;CL:0000222!2.31e-07!119 | |ontology_enrichment_celltype=CL:0000055!7.12e-16!180;CL:0000192!2.35e-11!42;CL:0000514!2.35e-11!42;CL:0000183!4.91e-11!59;CL:0000680!1.34e-10!57;CL:0000056!1.34e-10!57;CL:0000355!1.34e-10!57;CL:0000187!1.04e-09!54;CL:0000057!1.91e-09!75;CL:0000393!8.52e-09!60;CL:0000211!8.52e-09!60;CL:0000136!5.85e-08!15;CL:0000359!9.80e-08!32;CL:0000222!2.31e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.03e-09;13!CL:0000359;4.40e-08;32!CL:0002334;8.12e-08;12!CL:0000192;2.11e-07;43!CL:0000134;8.74e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.24e-10,43;CL:0000514,2.24e-10,43;CL:0000136,2.91e-10,15;CL:0000359,2.54e-08,32;CL:0002334,5.53e-08,12;CL:0000187,1.82e-07,55;CL:0000680,2.09e-07,58;CL:0000056,2.09e-07,58;CL:0000355,2.09e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.11e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.56e-13!143;UBERON:0002385!2.14e-10!63;UBERON:0001015!2.14e-10!63;UBERON:0000383!2.14e-10!63;UBERON:0002100!5.69e-10!216;UBERON:0004872!1.56e-09!84;UBERON:0001134!2.18e-09!61;UBERON:0002036!2.18e-09!61;UBERON:0003082!2.18e-09!61;UBERON:0000914!2.21e-09!83;UBERON:0002329!2.21e-09!83;UBERON:0003077!2.21e-09!83;UBERON:0003059!2.21e-09!83;UBERON:0007282!2.21e-09!83;UBERON:0009618!2.21e-09!83;UBERON:0007285!2.21e-09!83;UBERON:0004290!6.33e-09!70;UBERON:0000486!3.45e-08!82;UBERON:0003914!3.51e-08!118;UBERON:0001135!4.00e-08!15;UBERON:0003104!9.36e-08!238;UBERON:0009142!9.36e-08!238;UBERON:0001981!1.24e-07!60;UBERON:0007500!1.24e-07!60;UBERON:0004537!1.24e-07!60;UBERON:0006965!1.24e-07!60;UBERON:0000926!4.23e-07!448;UBERON:0004120!4.23e-07!448;UBERON:0006603!4.23e-07!448;UBERON:0000468!7.79e-07!659;UBERON:0000481!8.24e-07!347 | |ontology_enrichment_uberon=UBERON:0005256!4.56e-13!143;UBERON:0002385!2.14e-10!63;UBERON:0001015!2.14e-10!63;UBERON:0000383!2.14e-10!63;UBERON:0002100!5.69e-10!216;UBERON:0004872!1.56e-09!84;UBERON:0001134!2.18e-09!61;UBERON:0002036!2.18e-09!61;UBERON:0003082!2.18e-09!61;UBERON:0000914!2.21e-09!83;UBERON:0002329!2.21e-09!83;UBERON:0003077!2.21e-09!83;UBERON:0003059!2.21e-09!83;UBERON:0007282!2.21e-09!83;UBERON:0009618!2.21e-09!83;UBERON:0007285!2.21e-09!83;UBERON:0004290!6.33e-09!70;UBERON:0000486!3.45e-08!82;UBERON:0003914!3.51e-08!118;UBERON:0001135!4.00e-08!15;UBERON:0003104!9.36e-08!238;UBERON:0009142!9.36e-08!238;UBERON:0001981!1.24e-07!60;UBERON:0007500!1.24e-07!60;UBERON:0004537!1.24e-07!60;UBERON:0006965!1.24e-07!60;UBERON:0000926!4.23e-07!448;UBERON:0004120!4.23e-07!448;UBERON:0006603!4.23e-07!448;UBERON:0000468!7.79e-07!659;UBERON:0000481!8.24e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.14e-09;6!UBERON:0002358;1.14e-09;6!UBERON:0003684;1.14e-09;6!UBERON:0001178;1.14e-09;6!UBERON:0004457;7.59e-08;9!UBERON:0000042;7.59e-08;9!UBERON:0001135;8.56e-08;15!UBERON:0007100;2.24e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.56e-10,315;UBERON:0004120,8.56e-10,315;UBERON:0006603,8.56e-10,315;UBERON:0003688,1.22e-09,6;UBERON:0002358,1.22e-09,6;UBERON:0003684,1.22e-09,6;UBERON:0001178,1.22e-09,6;UBERON:0005256,2.65e-08,122;UBERON:0001135,6.03e-08,15;UBERON:0003104,9.95e-08,160;UBERON:0009142,9.95e-08,160;UBERON:0002385,1.07e-07,64;UBERON:0001015,1.07e-07,64;UBERON:0000383,1.07e-07,64;UBERON:0004872,1.51e-07,83;UBERON:0003101,9.85e-07,22;UBERON:0000079,9.85e-07,22 | |||
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| ||
|short_description=p@chr20:35176474..35176493,+ | |short_description=p@chr20:35176474..35176493,+ | ||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35176474..35176493, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35176474..35176493, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.24e-10 | 43 |
smooth muscle myoblast | 2.24e-10 | 43 |
fat cell | 2.91e-10 | 15 |
vascular associated smooth muscle cell | 2.54e-08 | 32 |
preadipocyte | 5.53e-08 | 12 |
muscle cell | 1.82e-07 | 55 |
muscle precursor cell | 2.09e-07 | 58 |
myoblast | 2.09e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.09e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.56e-10 | 315 |
mesoderm-derived structure | 8.56e-10 | 315 |
presumptive mesoderm | 8.56e-10 | 315 |
omentum | 1.22e-09 | 6 |
peritoneum | 1.22e-09 | 6 |
abdominal cavity | 1.22e-09 | 6 |
visceral peritoneum | 1.22e-09 | 6 |
trunk mesenchyme | 2.65e-08 | 122 |
smooth muscle tissue | 6.03e-08 | 15 |
mesenchyme | 9.95e-08 | 160 |
entire embryonic mesenchyme | 9.95e-08 | 160 |
muscle tissue | 1.07e-07 | 64 |
musculature | 1.07e-07 | 64 |
musculature of body | 1.07e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 1.51e-07 | 83 |
male organism | 9.85e-07 | 22 |
male reproductive system | 9.85e-07 | 22 |