FFCP PHASE1:Hg19::chr20:34304657..34304662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9584 | |EntrezGene=9584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15923 | |HGNC=15923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_ENST00000475651_5end | |association_with_transcript=46bp_to_ENST00000475651_5end | ||
|cluster_id=chr20:34304657..34304662,- | |||
|description=CAGE_peak_6_at_RBM39_5end | |description=CAGE_peak_6_at_RBM39_5end | ||
|id=chr20:34304657..34304662,- | |id=chr20:34304657..34304662,- | ||
|ontology_enrichment_celltype=CL:0002087!1.16e-15!119;CL:0000037!1.29e-13!172;CL:0000566!1.29e-13!172;CL:0002031!4.30e-13!124;CL:0000988!7.04e-13!182;CL:0002032!1.72e-12!165;CL:0000837!1.72e-12!165;CL:0000738!2.21e-12!140;CL:0000860!1.06e-10!45;CL:0002057!7.61e-10!42;CL:0000542!1.00e-08!53;CL:0000051!1.00e-08!53;CL:0000838!2.49e-08!52 | |ontology_enrichment_celltype=CL:0002087!1.16e-15!119;CL:0000037!1.29e-13!172;CL:0000566!1.29e-13!172;CL:0002031!4.30e-13!124;CL:0000988!7.04e-13!182;CL:0002032!1.72e-12!165;CL:0000837!1.72e-12!165;CL:0000738!2.21e-12!140;CL:0000860!1.06e-10!45;CL:0002057!7.61e-10!42;CL:0000542!1.00e-08!53;CL:0000051!1.00e-08!53;CL:0000838!2.49e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.61e-19;3!CL:0000791;3.81e-12;18!CL:0000789;3.81e-12;18!CL:0002419;3.81e-12;18!CL:0000084;1.88e-11;25!CL:0000542;2.29e-10;53!CL:0000624;3.88e-10;6!CL:0002393;8.43e-10;6!CL:0002397;8.43e-10;6!CL:0000226;5.95e-09;3!CL:0000842;5.95e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,8.96e-20,3;CL:0000825,8.96e-20,3;CL:0000838,8.19e-18,52;CL:0000542,1.99e-17,53;CL:0000051,1.99e-17,53;CL:0002087,2.98e-17,115;CL:0000738,5.75e-14,136;CL:0000037,3.69e-13,168;CL:0002031,7.26e-13,120;CL:0000988,2.90e-12,177;CL:0000791,3.33e-12,18;CL:0000789,3.33e-12,18;CL:0002420,3.33e-12,18;CL:0002419,3.33e-12,18;CL:0000790,3.33e-12,18;CL:0000084,1.65e-11,25;CL:0000827,1.65e-11,25;CL:0002032,4.50e-11,161;CL:0000837,4.50e-11,161;CL:0000624,3.72e-10,6;CL:0000226,2.87e-09,3;CL:0000842,2.87e-09,3;CL:0002393,9.01e-07,9;CL:0002397,9.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;3.81e-12;18!CL:0000051;2.29e-10;53 | |||
|ontology_enrichment_disease=DOID:14566!5.27e-26!239;DOID:162!1.73e-25!235;DOID:0050687!2.30e-17!143;DOID:305!3.75e-14!106;DOID:0050686!1.48e-12!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.309868802321207,0.142169232487422,0.587200878669695,1.66198622559563,1.80490002723128,3.03815219002193,0,0,0,0,0,0.485168122375632,0.464858073811369,0.411167888021826,0.309706370895104,0.575384784644301,1.0246428261164,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.598390972864896,0.426224750532694,0.580418477257168,0,0.622822248995575,0.75374599577023,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,1.28019066769952,0.400395987036012,0,0,0,4.55370375287559,0.587237189370939,1.91136614062614,0,0,0.263384084775077,2.16380747125216,2.75107533924415,2.87842098599313,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0,0.328875809207352,0,0,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.81446068902259,2.40696176205157,4.05508330871837,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.675105328965065,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,1.97030760201927,2.37190332345469,4.49200626979119,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,1.86091223510599,1.94142780736755,0.960548020230999,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.371606350251437,0.577076851905779,0.284567373393656,0.159426272728822,0.59873811429845,0,0,0,0.280797178113459,0.456469358066384,0.626719583092093,0,0,0,1.00899853595524,1.27753871307098,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0.556543525114529,0.16480387422676,0.63337622438398,0,0,1.0077309914171,0.102268682502155,0.246169610922139,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.236387681767936,1.37897349296586,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0.227884111694002,0.23056390438806,0.448788222048861,0.108647371922008,0,0,0,0,0,0.498635045700469,0.225595660617181,0,0.335643173951685,0.569261198172555,0.158936578980379,0.421996129056054,0.326465616318295,0.282706142867882,0.216388639742091,0,0,0,0,0.123563938946503,0.522109747527277,0,0,0,0.547364367646998,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.277349346026277,0,0,0.435296032902013,0,0.687944129886466,0.580537987734511,0.146178634172371,0.0821154570532092,0,0,0,0,0.397429223405979,0,0.782205530939212,0,0.213452994739353,0.19980960958213,0.432271251462318,0.114536596165916,0,0.720273989940749,0,0.471388069233591,0.135904206073614,0,0.407992870545287,0.288950589901519,0,0,0,0.859530882839914,1.57732412567589,0.279282401272254,0,0,0.599037001496973,0,0,0,0,0,0.472699093843342,0.247247575143499,0.337017719270924,0.590564889088493,0,0,0,0.803765742325096,0.137539436597234,0,0,0,0,0.670869375198532,0,0,0,0.717149357331379,0.191915197319445,0,0,0.25426853765475,0,0,0.326587360109409,0,0.574647645245373,0,0.339936274560377,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0.592834895693833,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0.276697269872462,0.124980407962107,0.454947352624943,0.285465333544967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| ||
|short_description=p6@RBM39 | |short_description=p6@RBM39 | ||
}} | }} |
Latest revision as of 20:56, 15 September 2015
Short description: | p6@RBM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RBM39_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000475651_5end |
EntrezGene: | RBM39 |
HGNC: | 15923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 8.96e-20 | 3 |
pro-NK cell | 8.96e-20 | 3 |
lymphoid lineage restricted progenitor cell | 8.19e-18 | 52 |
lymphocyte | 1.99e-17 | 53 |
common lymphoid progenitor | 1.99e-17 | 53 |
nongranular leukocyte | 2.98e-17 | 115 |
leukocyte | 5.75e-14 | 136 |
hematopoietic stem cell | 3.69e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 7.26e-13 | 120 |
hematopoietic cell | 2.90e-12 | 177 |
mature alpha-beta T cell | 3.33e-12 | 18 |
alpha-beta T cell | 3.33e-12 | 18 |
immature T cell | 3.33e-12 | 18 |
mature T cell | 3.33e-12 | 18 |
immature alpha-beta T cell | 3.33e-12 | 18 |
T cell | 1.65e-11 | 25 |
pro-T cell | 1.65e-11 | 25 |
hematopoietic oligopotent progenitor cell | 4.50e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.50e-11 | 161 |
CD4-positive, alpha-beta T cell | 3.72e-10 | 6 |
single nucleate cell | 2.87e-09 | 3 |
mononuclear cell | 2.87e-09 | 3 |
intermediate monocyte | 9.01e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.01e-07 | 9 |