FFCP PHASE1:Hg19::chr20:31897630..31897644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:31897630..31897644,+ | |||
|coexpression_cluster_id=C444 | |||
|description=CAGE_peak_at_chr20:31897630..31897644,+ | |description=CAGE_peak_at_chr20:31897630..31897644,+ | ||
|id=chr20:31897630..31897644,+ | |id=chr20:31897630..31897644,+ | ||
|ontology_enrichment_celltype=CL:1000415!7.49e-09!2 | |ontology_enrichment_celltype=CL:1000415!7.49e-09!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.36e-13;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!4.59e-32!2;UBERON:0000341!1.60e-31!2;UBERON:0002171!8.86e-17!1;UBERON:0006518!8.86e-17!1;UBERON:0008949!8.86e-17!1;UBERON:0000101!8.86e-17!1;UBERON:0002167!8.86e-17!1;UBERON:0002372!1.21e-16!1;UBERON:0001961!1.21e-16!1;UBERON:0001744!1.21e-16!1;UBERON:0001735!1.21e-16!1;UBERON:0005178!2.56e-11!34;UBERON:0002224!2.56e-11!34;UBERON:0005181!5.39e-11!35;UBERON:0000065!3.39e-10!53;UBERON:0008947!3.98e-10!38;UBERON:0003258!3.98e-10!38;UBERON:0003126!7.00e-10!7;UBERON:0001005!7.00e-10!7;UBERON:0001004!1.97e-07!72;UBERON:0000915!2.16e-07!52;UBERON:0000974!4.52e-07!10;UBERON:0002048!8.27e-07!22;UBERON:0000117!8.27e-07!22;UBERON:0000171!8.27e-07!22;UBERON:0000170!8.27e-07!22;UBERON:0005597!8.27e-07!22;UBERON:0000118!8.27e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.86e-79;2!UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0003126;1.36e-23;7!UBERON:0001005;1.36e-23;7!UBERON:0000341;4.66e-21;2!UBERON:0007196;1.31e-11;15!UBERON:0001558;1.31e-11;15!UBERON:0005181;1.81e-09;35!UBERON:0005178;2.41e-09;34!UBERON:0002224;2.41e-09;34!UBERON:0000974;6.34e-08;6!UBERON:0000065;2.02e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.34e-79,2;UBERON:0002171,3.30e-40,1;UBERON:0006518,3.30e-40,1;UBERON:0008949,3.30e-40,1;UBERON:0000101,3.30e-40,1;UBERON:0002167,3.30e-40,1;UBERON:0003126,1.28e-23,7;UBERON:0001005,1.28e-23,7;UBERON:0000341,4.66e-21,2;UBERON:0007196,1.27e-11,15;UBERON:0001558,1.27e-11,15;UBERON:0005178,2.76e-11,34;UBERON:0002224,2.76e-11,34;UBERON:0005181,5.49e-11,35;UBERON:0008947,3.49e-10,38;UBERON:0003258,3.49e-10,38;UBERON:0000915,1.20e-07,52;UBERON:0000065,2.17e-07,54 | |||
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|short_description=p@chr20:31897630..31897644,+ | |short_description=p@chr20:31897630..31897644,+ | ||
}} | }} |
Latest revision as of 13:07, 28 July 2015
Short description: | p@chr20:31897630..31897644, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:31897630..31897644, + |
Coexpression cluster: | C444_CD14_trachea_tonsil_tongue_throat_salivary_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.34e-79 | 2 |
lower lobe of right lung | 3.30e-40 | 1 |
right lung lobe | 3.30e-40 | 1 |
lower lobe of lung | 3.30e-40 | 1 |
lobe of lung | 3.30e-40 | 1 |
right lung | 3.30e-40 | 1 |
trachea | 1.28e-23 | 7 |
respiratory airway | 1.28e-23 | 7 |
throat | 4.66e-21 | 2 |
tracheobronchial tree | 1.27e-11 | 15 |
lower respiratory tract | 1.27e-11 | 15 |
thoracic cavity element | 2.76e-11 | 34 |
thoracic cavity | 2.76e-11 | 34 |
thoracic segment organ | 5.49e-11 | 35 |
respiratory primordium | 3.49e-10 | 38 |
endoderm of foregut | 3.49e-10 | 38 |
thoracic segment of trunk | 1.20e-07 | 52 |
respiratory tract | 2.17e-07 | 54 |