FFCP PHASE1:Hg19::chr6:160679846..160679859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6582 | |EntrezGene=6582 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10966 | |HGNC=10966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000474259_5end | |association_with_transcript=-25bp_to_ENST00000474259_5end | ||
|cluster_id=chr6:160679846..160679859,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_SLC22A2_5end | |description=CAGE_peak_1_at_SLC22A2_5end | ||
|id=chr6:160679846..160679859,- | |id=chr6:160679846..160679859,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.43e-21;3!UBERON:0003057;1.43e-21;3!UBERON:0003056;6.05e-21;3!UBERON:0010115;2.43e-16;1!UBERON:0005425;2.43e-16;1!UBERON:0003918;1.37e-14;10!UBERON:0007687;1.37e-14;10!UBERON:0003104;1.54e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.37e-39!57;UBERON:0005068!8.37e-39!57;UBERON:0006241!8.37e-39!57;UBERON:0007135!8.37e-39!57;UBERON:0003075!3.56e-34!86;UBERON:0007284!3.56e-34!86;UBERON:0005743!9.50e-34!86;UBERON:0001017!8.21e-33!82;UBERON:0007023!8.71e-33!115;UBERON:0000073!1.46e-32!94;UBERON:0001016!1.46e-32!94;UBERON:0002346!2.19e-32!90;UBERON:0002616!1.27e-27!59;UBERON:0000955!4.49e-25!69;UBERON:0006238!4.49e-25!69;UBERON:0003076!3.00e-23!15;UBERON:0003057!3.00e-23!15;UBERON:0002780!2.79e-20!41;UBERON:0001890!2.79e-20!41;UBERON:0006240!2.79e-20!41;UBERON:0002298!7.40e-20!8;UBERON:0003080!9.91e-20!42;UBERON:0001893!2.34e-18!34;UBERON:0004121!7.95e-17!169;UBERON:0000924!2.74e-16!173;UBERON:0006601!2.74e-16!173;UBERON:0004732!3.19e-16!13;UBERON:0002791!3.94e-16!33;UBERON:0002020!1.42e-15!34;UBERON:0003528!1.42e-15!34;UBERON:0001950!1.58e-15!20;UBERON:0002240!4.73e-15!3;UBERON:0000033!6.93e-15!123;UBERON:0003056!1.14e-14!61;UBERON:0001896!1.72e-14!3;UBERON:0005290!1.72e-14!3;UBERON:0010096!1.72e-14!3;UBERON:0002619!4.84e-14!22;UBERON:0000153!5.95e-14!129;UBERON:0007811!5.95e-14!129;UBERON:0001869!7.12e-14!32;UBERON:0004733!5.63e-13!12;UBERON:0002028!5.63e-13!12;UBERON:0007277!5.63e-13!12;UBERON:0000956!3.06e-12!25;UBERON:0000203!3.06e-12!25;UBERON:0002360!1.33e-10!2;UBERON:0000094!1.33e-10!2;UBERON:0007645!1.33e-10!2;UBERON:0000025!1.55e-10!194;UBERON:0005162!5.07e-10!2;UBERON:0000122!5.07e-10!2;UBERON:0005174!3.31e-09!5;UBERON:0001137!3.31e-09!5;UBERON:0002021!1.88e-08!5;UBERON:0004111!2.40e-07!241;UBERON:0000062!4.16e-07!511;UBERON:0000483!4.92e-07!309;UBERON:0000119!6.65e-07!312;UBERON:0006331!8.82e-07!3;UBERON:0000988!9.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;4.04e-31;2!UBERON:0000094;4.04e-31;2!UBERON:0010743;4.04e-31;2!UBERON:0002240;1.43e-21;3!UBERON:0005174;1.43e-21;3!UBERON:0001137;1.43e-21;3!UBERON:0001282;1.31e-16;1!UBERON:0009842;1.31e-16;1!UBERON:0003704;1.31e-16;1!UBERON:0001171;1.31e-16;1!UBERON:0001172;1.31e-16;1!UBERON:0002363;2.43e-16;1!UBERON:0000941;2.43e-16;1!UBERON:0001785;2.43e-16;1!UBERON:0002464;2.43e-16;1!UBERON:0004904;2.43e-16;1!UBERON:0001021;2.43e-16;1!UBERON:0000489;2.20e-13;29!UBERON:0000007;7.79e-09;2!UBERON:0003714;7.79e-09;2!UBERON:0005162;7.79e-09;2!UBERON:0000122;7.79e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,4.04e-31,2;UBERON:0000094,4.04e-31,2;UBERON:0010743,4.04e-31,2;UBERON:0002240,1.43e-21,3;UBERON:0005174,1.43e-21,3;UBERON:0001137,1.43e-21,3;UBERON:0001282,1.21e-16,1;UBERON:0009842,1.21e-16,1;UBERON:0003704,1.21e-16,1;UBERON:0001171,1.21e-16,1;UBERON:0001172,1.21e-16,1;UBERON:0000941,2.25e-16,1;UBERON:0001785,2.25e-16,1;UBERON:0002464,2.25e-16,1;UBERON:0004904,2.25e-16,1;UBERON:0001021,2.25e-16,1;UBERON:0003902,2.25e-16,1;UBERON:0005425,2.25e-16,1;UBERON:0002363,3.07e-16,1;UBERON:0007645,3.07e-16,1;UBERON:0007647,3.07e-16,1;UBERON:0010115,3.07e-16,1;UBERON:0000489,1.62e-12,31;UBERON:0000966,5.09e-11,6;UBERON:0005388,5.09e-11,6;UBERON:0001802,5.09e-11,6;UBERON:0003076,7.67e-10,15;UBERON:0003057,7.67e-10,15;UBERON:0003714,7.49e-09,2;UBERON:0005162,7.49e-09,2;UBERON:0000122,7.49e-09,2;UBERON:0000007,8.09e-09,2;UBERON:0007023,6.92e-08,114;UBERON:0001016,1.23e-07,89 | |||
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| ||
|short_description=p1@SLC22A2 | |short_description=p1@SLC22A2 | ||
}} | }} |
Latest revision as of 16:08, 16 September 2015
Short description: | p1@SLC22A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC22A2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -25bp_to_ENST00000474259_5end |
EntrezGene: | SLC22A2 |
HGNC: | 10966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meninx | 4.04e-31 | 2 |
membrane organ | 4.04e-31 | 2 |
meningeal cluster | 4.04e-31 | 2 |
spinal cord | 1.43e-21 | 3 |
dorsal region element | 1.43e-21 | 3 |
dorsum | 1.43e-21 | 3 |
intralobular bile duct | 1.21e-16 | 1 |
acinus | 1.21e-16 | 1 |
intrahepatic bile duct | 1.21e-16 | 1 |
portal lobule | 1.21e-16 | 1 |
hepatic acinus | 1.21e-16 | 1 |
cranial nerve II | 2.25e-16 | 1 |
cranial nerve | 2.25e-16 | 1 |
nerve trunk | 2.25e-16 | 1 |
nerve connecting eye with brain | 2.25e-16 | 1 |
nerve | 2.25e-16 | 1 |
retinal neural layer | 2.25e-16 | 1 |
presumptive neural retina | 2.25e-16 | 1 |
dura mater | 3.07e-16 | 1 |
future meninx | 3.07e-16 | 1 |
ectomeninx | 3.07e-16 | 1 |
future dura mater | 3.07e-16 | 1 |
cavitated compound organ | 1.62e-12 | 31 |
retina | 5.09e-11 | 6 |
photoreceptor array | 5.09e-11 | 6 |
posterior segment of eyeball | 5.09e-11 | 6 |
posterior neural tube | 7.67e-10 | 15 |
chordal neural plate | 7.67e-10 | 15 |
neural tissue | 7.49e-09 | 2 |
multi cell component structure | 7.49e-09 | 2 |
neuron projection bundle | 7.49e-09 | 2 |
pituitary gland | 8.09e-09 | 2 |
adult organism | 6.92e-08 | 114 |
nervous system | 1.23e-07 | 89 |