FFCP PHASE1:Hg19::chr20:19193296..19193326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57419 | |EntrezGene=57419 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10977 | |HGNC=10977 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC58 | |UniProt=Q9HC58 | ||
|association_with_transcript=6bp_to_ENST00000328041,NM_020689,uc002wrl.2_5end | |association_with_transcript=6bp_to_ENST00000328041,NM_020689,uc002wrl.2_5end | ||
|cluster_id=chr20:19193296..19193326,+ | |||
|description=CAGE_peak_3_at_SLC24A3_5end | |description=CAGE_peak_3_at_SLC24A3_5end | ||
|id=chr20:19193296..19193326,+ | |id=chr20:19193296..19193326,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.12e-09!42;CL:0000860!3.83e-08!45;CL:0000763!9.20e-08!112;CL:0000049!9.20e-08!112;CL:0000839!3.91e-07!70;CL:0000557!7.28e-07!71;CL:0000766!8.87e-07!76 | |ontology_enrichment_celltype=CL:0002057!2.12e-09!42;CL:0000860!3.83e-08!45;CL:0000763!9.20e-08!112;CL:0000049!9.20e-08!112;CL:0000839!3.91e-07!70;CL:0000557!7.28e-07!71;CL:0000766!8.87e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.20e-11;5!CL:0000860;5.40e-11;33!CL:0002057;5.40e-11;33!CL:0000473;3.88e-07;39!CL:0000234;3.88e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.17e-11,5;CL:0002028,2.17e-11,5;CL:0000839,7.39e-10,66;CL:0000763,1.08e-09,108;CL:0000049,1.08e-09,108;CL:0000766,1.80e-09,72;CL:0000557,8.32e-09,67;CL:0000860,1.65e-08,42;CL:0002057,1.65e-08,42;CL:0000473,6.29e-07,48;CL:0000234,6.29e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;8.53e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;6.93e-09;4!DOID:1612;6.93e-09;4!DOID:171;4.63e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.64e-09,4;DOID:1612,6.64e-09,4;DOID:171,3.68e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.58e-37!115;UBERON:0001049!1.14e-15!57;UBERON:0005068!1.14e-15!57;UBERON:0006241!1.14e-15!57;UBERON:0007135!1.14e-15!57;UBERON:0002616!3.75e-15!59;UBERON:0001893!6.42e-13!34;UBERON:0002020!6.53e-13!34;UBERON:0003528!6.53e-13!34;UBERON:0001017!1.15e-12!82;UBERON:0002791!1.20e-12!33;UBERON:0003080!1.65e-12!42;UBERON:0001869!2.47e-12!32;UBERON:0005743!4.27e-12!86;UBERON:0002780!4.38e-12!41;UBERON:0001890!4.38e-12!41;UBERON:0006240!4.38e-12!41;UBERON:0000955!4.70e-12!69;UBERON:0006238!4.70e-12!69;UBERON:0000073!1.83e-11!94;UBERON:0001016!1.83e-11!94;UBERON:0002619!2.81e-11!22;UBERON:0002346!4.27e-11!90;UBERON:0001950!1.17e-09!20;UBERON:0000956!3.94e-09!25;UBERON:0000203!3.94e-09!25;UBERON:0003075!5.70e-09!86;UBERON:0007284!5.70e-09!86;UBERON:0000924!3.81e-07!173;UBERON:0006601!3.81e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;4.26e-11;5!UBERON:0005423;4.26e-11;5!UBERON:0000922;1.16e-09;49!UBERON:0002346;3.36e-09;4!UBERON:0000923;3.36e-09;4!UBERON:0010316;3.36e-09;4!UBERON:0005291;3.36e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.69e-09,114;UBERON:0002390,2.43e-07,98;UBERON:0003061,2.43e-07,98;UBERON:0002371,4.26e-07,76 | |||
|phase1_expression=0,0,0.140954404095971,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,2.26725566213286,0.970336244751265,0.697287110717054,0.411167888021826,3.40677007984614,0.28769239232215,1.7931249457037,0.945928919554341,1.37898272294647,2.5819387343353,0,0.752969358170419,3.0019676506363,2.69668181334102,0.918251677112708,0.320929027076094,1.91801137739712,0.329851300186716,1.99463657621632,0.852449501065388,0.290209238628584,5.10646702222026,1.24564449799115,1.50749199154046,3.65038042894141,2.17188844705117,1.21079900526674,3.31449872388808,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,2.80254281490768,1.05353633910031,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0.98667019366864,0,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0.323745888736263,0.421352420106746,0,0.122834317311768,0.309977343527296,2.37600571456411,0.247266929278557,0.910161361938026,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,5.15091697256924,0,0,0,0,0,0,0,0,0,10.8385912337108,10.0375214775078,10.3664057770386,9.51191692551945,9.4681825069785,0,0,0,0,0,0,0,0.336393253036082,1.74384027533312,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,1.24324654030811,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0.173767228936166,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.762520775695299,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0.6196469961995,0,0.286822704408103,0,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0.507447609232169,2.29391162142713,1.13929437434833,0.714695326373367,0.411362273086194,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0.766021480529467,0,0,0.280797178113459,0,0,10.0253790836027,0.846458889008016,0,0,0,0,0,0,0.166849141711909,0,3.34087408674291,0,4.32729085561573,1.6653598399891,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0.994147647766298,0.984685914873589,0,0,0,1.59398390600856,1.10513566212459,0,0,0,0,0,0,0,0.789147245095469,0,0,2.90799823828566,0.371072392647405,0,5.20855522170466,2.44887999989348,0.724999575434793,0,0,0,0,0.874813840149763,1.38899995946634,2.65722415744152,1.20596438625408,3.05163472634166,1.21637185924347,4.13766666534966,0.219385397153973,0,0,2.15460723810632,1.02547850262301,0,0,0.108647371922008,0.638002319463839,0.549585560411174,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,3.98104772431402,0.707660516026713,1.22206028986725,0,0,0.208843899010911,0.808813595768125,1.60515529459758,5.3880822516828,0,0,0,1.97292201424695,1.20990716048664,1.22429104652196,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.06687918137261,0,1.35588444468319,0,0,0.823040347426423,0.391102765469606,0,2.13452994739353,1.59847687665704,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,2.55493176133945,0,0.788662062837943,0.558564802544508,1.3749625440701,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,2.16179930125442,0,0,0,0,0,0,8.74752658790234,3.26888174667781,0.160753148465019,0.412618309791701,0,0,0.77380195455795,0.668245123238271,0,0.157611414598396,0.419636705079985,0,0,0,0,0,0,0,0.864221491201268,0,0,0.164185041498678,0,0,0.146552233678082,1.32506888912221,0.258565912723101,1.05786081394152,0,0,0.640724475406168,0.628817220398664,2.48543433208317,0.496166021811951,0,0,0,3.80812462358632,1.5041393641362,1.83807346058077,1.31149052283922,0,1.77213635993397,0.488105059607853,0.250381861413,0.573409195690071,0.776503360757966,0.993542447062135,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.466311601748341,0,0.318593534327405,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0.751288044986092,0,0.406870733204662,0.727394636810238,0.322231671127465,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.930053882193542,1.14495775979091,0,0,0,0,0.213383459388282,0,0,0,0,0,0.255788742607303,0,14.3112007088866,0,4.75251083871271,14.8802444071178,4.95743057036009,1.67593475391973,0,0,0,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| ||
|short_description=p3@SLC24A3 | |short_description=p3@SLC24A3 | ||
}} | }} |
Latest revision as of 08:21, 20 September 2015
Short description: | p3@SLC24A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC24A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000328041, NM_020689, uc002wrl.2_5end |
EntrezGene: | SLC24A3 |
HGNC: | 10977 |
UniProt: | Q9HC58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.17e-11 | 5 |
basophil mast progenitor cell | 2.17e-11 | 5 |
myeloid lineage restricted progenitor cell | 7.39e-10 | 66 |
myeloid cell | 1.08e-09 | 108 |
common myeloid progenitor | 1.08e-09 | 108 |
myeloid leukocyte | 1.80e-09 | 72 |
granulocyte monocyte progenitor cell | 8.32e-09 | 67 |
classical monocyte | 1.65e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-08 | 42 |
defensive cell | 6.29e-07 | 48 |
phagocyte | 6.29e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.69e-09 | 114 |
hematopoietic system | 2.43e-07 | 98 |
blood island | 2.43e-07 | 98 |
bone marrow | 4.26e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.64e-09 | 4 |
breast cancer | 6.64e-09 | 4 |
neuroectodermal tumor | 3.68e-07 | 10 |