FFCP PHASE1:Hg19::chr20:17641097..17641128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6238 | |EntrezGene=6238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10448 | |HGNC=10448 | ||
|TSSclassifier=strong | |||
|UniProt=A7BI36 | |UniProt=A7BI36 | ||
|association_with_transcript=23bp_to_AB287347,AB384598_5end | |association_with_transcript=23bp_to_AB287347,AB384598_5end | ||
|cluster_id=chr20:17641097..17641128,- | |||
|description=CAGE_peak_3_at_RRBP1_5end | |description=CAGE_peak_3_at_RRBP1_5end | ||
|id=chr20:17641097..17641128,- | |id=chr20:17641097..17641128,- | ||
|ontology_enrichment_celltype=CL:0000055!2.88e-11!180;CL:0000057!7.65e-10!75 | |ontology_enrichment_celltype=CL:0000055!2.88e-11!180;CL:0000057!7.65e-10!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.85e-13,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.12e-11!143;UBERON:0000468!2.23e-08!659;UBERON:0003914!2.10e-07!118;UBERON:0000914!2.12e-07!83;UBERON:0002329!2.12e-07!83;UBERON:0003077!2.12e-07!83;UBERON:0003059!2.12e-07!83;UBERON:0007282!2.12e-07!83;UBERON:0009618!2.12e-07!83;UBERON:0007285!2.12e-07!83;UBERON:0000490!6.26e-07!138;UBERON:0000475!9.47e-07!365 | |ontology_enrichment_uberon=UBERON:0005256!6.12e-11!143;UBERON:0000468!2.23e-08!659;UBERON:0003914!2.10e-07!118;UBERON:0000914!2.12e-07!83;UBERON:0002329!2.12e-07!83;UBERON:0003077!2.12e-07!83;UBERON:0003059!2.12e-07!83;UBERON:0007282!2.12e-07!83;UBERON:0009618!2.12e-07!83;UBERON:0007285!2.12e-07!83;UBERON:0000490!6.26e-07!138;UBERON:0000475!9.47e-07!365 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.03e-08,122;UBERON:0003102,3.12e-07,99;UBERON:0003104,5.09e-07,160;UBERON:0009142,5.09e-07,160 | |||
|phase1_expression=1.09007027562334,3.42560838225573,1.26858963686374,0,0,0,2.53299878168311,0,0,0.245733936501509,1.39560233594486,0.655324116390517,0.527533956456907,0.495065411840187,0.994192127183747,2.6893005858071,0.602694528023977,0.730310090387373,1.95173119516203,0.492484232307152,1.42800483870977,2.82109249330279,0,0.684372125364421,0.502170558379211,0.687720651731561,0.0821005894499457,0.393553906568396,0,0.383829398097213,0.928896739896456,1.83884244895785,2.10844143144775,1.47901604066715,0.542270404062111,0.568676929949686,0,0,0,0.651032612147555,0,0.32389366601898,0.515151135268373,0.290796477559129,1.13362783106643,0.485168122375632,1.62700325833979,0.822335776043652,0,1.1507695692886,1.0246428261164,0.236482229888585,0.344745680736619,0.645484683583826,0,1.31769637679823,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,1.31940520074686,0.598390972864896,0.852449501065388,0.580418477257168,0,0.622822248995575,1.00499466102697,1.5644487552606,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.334372990781356,0,0,0,0.557052284425868,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.144824403882799,0,2.68280343881454,0.255725123687061,2.1686349143074,0,0.434539556882471,5.5670016293577,2.91980922181582,0.378139268656271,1.10864698731282,1.05401742831751,0.261958150995425,0,0.370784442784429,0,0,0.797747763113191,0.238490624305342,0,0,0,0,0.694281003215189,1.13061588384802,0.419499436209906,0.825354125820202,1.46296476575767,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0.81014194788176,0.535798369704479,0.44905874525234,0.563057402416611,0,0,0.916008719652036,0,0,0.872188104285069,2.48485975847659,0.886413581652058,1.05927344650575,5.44989579422746,2.4826786753885,1.68203280042692,2.1349799145941,2.22000793575444,0,1.34710672069688,1.30769522490767,1.21085942115945,2.30470369792,0.468642863667593,0.624320153660641,0,1.19558944441441,1.52664848236894,0.809364721840658,0.561803226808994,0.408308342509787,2.21101771161182,2.16984140469107,0,5.19260551484969,0,1.43723628363248,1.0100166837244,3.25308151667107,0,2.19488810440419,2.75839016219118,1.05166641234618,0.567160915800105,6.09924761342131,1.49490172172997,0.847727604638247,2.70081986475962,2.06105058476878,3.86460810068444,0.558350568994769,4.05063197379039,1.75386609290158,2.01947019395292,1.10459878370759,2.10139873864455,6.74518225781567,1.20902517873168,1.01736355386293,0.773043412653187,0.272746120590835,0.573609190778008,0.121973706129595,0.927708378250397,0.580969714347592,0.414644220061482,0.252320850875628,0.36497735907583,3.12899064659632,2.57296375277154,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.482022059766964,0.441175890929576,0.653638332277218,0,0.404493924480493,0.392442930250692,1.92373578473195,0.738155454624648,2.80483547606892,0.4115740113314,0,5.07020139287323,3.9313088667105,1.18157981336281,0,2.82873408649161,0.171567810298526,0.878002283269004,0,0.804231779293047,0.370353780634118,0.651616610620649,0,1.44331342025273,0,0.587043471179108,0.288732895522148,0.462985512576611,1.33177906564219,0,0,0.492434012174795,0.234004265139238,0.743155811443641,0,1.17587489739202,0.425325291727159,0.0895585227028483,0.871901815541886,1.15014803749563,0.985326475791887,0.176096868026452,0,0.720599767084807,0.25248486685276,0.190493682876507,0.381988425558278,1.17217447210047,0,0.925447434329912,0.300343057843917,0.571652865261156,0.448524337381443,1.74384027533312,0.51336800074665,1.03417372606222,0,1.690605505112,0.797814349754612,1.04007436911366,0.771622122786426,0,1.5985330740966,1.28680194292333,4.34097284313154,0,0.65147236858747,0,0.791951872933429,0.904318131178758,2.61460037580088,1.19967589418468,0,0,6.32501818449095,0.718874566474748,1.14861935834114,0,1.44781306667579,3.90405012845728,0.179060963239896,0.224170287987055,0.197030760201927,1.07813787429759,0.641715181398742,0.508189248444927,1.30139853857622,0,0.502548796003046,0.637938751653163,2.24702107184155,0,0,0.736148950314839,1.00034104211935,0.813795071099207,2.07970861530807,4.10386674233472,1.57702415033935,0.937131319941706,1.50473049863859,0,0,0,1.29058417979192,1.47702144595741,0.587403472388222,0.686286847621712,0,0,0.426910231213777,0,0,0,0.248107807818777,1.38115775959256,3.08726103876381,1.66580894032411,0,1.60853921143608,1.48418066444991,3.08419387605311,0.355123450626254,0.410635780069046,1.55776328755086,1.85936605535935,2.05461064305758,1.00253235151642,1.47329582297434,2.18147451512753,3.45973219212762,2.36023946926963,0,0.539107359730903,0.784349769176855,1.46139224653261,0.316654886678627,1.13733384070897,0.680374821106063,1.29549549661284,1.54227252690289,0.812839312631559,2.5084488692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| ||
|short_description=p3@RRBP1 | |short_description=p3@RRBP1 | ||
}} | }} |
Latest revision as of 06:32, 20 September 2015
Short description: | p3@RRBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RRBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_AB287347, AB384598_5end |
EntrezGene: | RRBP1 |
HGNC: | 10448 |
UniProt: | A7BI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.85e-13 | 76 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 3.03e-08 | 122 |
surface structure | 3.12e-07 | 99 |
mesenchyme | 5.09e-07 | 160 |
entire embryonic mesenchyme | 5.09e-07 | 160 |