FFCP PHASE1:Hg19::chr20:123216..123241,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81623 | |EntrezGene=81623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15900 | |HGNC=15900 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYW3 | |UniProt=Q9BYW3 | ||
|association_with_transcript=-10bp_to_NM_030931,uc002wcx.2_5end | |association_with_transcript=-10bp_to_NM_030931,uc002wcx.2_5end | ||
|cluster_id=chr20:123216..123241,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_DEFB126_5end | |description=CAGE_peak_1_at_DEFB126_5end | ||
|id=chr20:123216..123241,+ | |id=chr20:123216..123241,+ | ||
|ontology_enrichment_celltype=CL:0002566!6.97e-12!1 | |ontology_enrichment_celltype=CL:0002566!6.97e-12!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.48e-18;2!UBERON:0009117;3.47e-14;10!UBERON:0005564;3.47e-14;10 | |||
|ontology_enrichment_disease=DOID:1909!6.01e-22!2;DOID:171!6.16e-10!10 | |ontology_enrichment_disease=DOID:1909!6.01e-22!2;DOID:171!6.16e-10!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.98e-33!3;UBERON:0004054!5.98e-33!3;UBERON:0005904!6.79e-25!4;UBERON:0003135!1.96e-24!11;UBERON:0003101!3.66e-17!22;UBERON:0000079!3.66e-17!22;UBERON:0000473!1.13e-12!8;UBERON:0001301!2.63e-12!1;UBERON:0001000!2.93e-12!1;UBERON:0005352!2.93e-12!1;UBERON:0000998!5.62e-12!1;UBERON:0006868!5.62e-12!1;UBERON:0005156!3.28e-08!59;UBERON:0000990!3.28e-08!59;UBERON:0003133!1.15e-07!48;UBERON:0001003!3.05e-07!14;UBERON:0007376!3.05e-07!14;UBERON:0007383!3.05e-07!14 | |ontology_enrichment_uberon=UBERON:0006947!5.98e-33!3;UBERON:0004054!5.98e-33!3;UBERON:0005904!6.79e-25!4;UBERON:0003135!1.96e-24!11;UBERON:0003101!3.66e-17!22;UBERON:0000079!3.66e-17!22;UBERON:0000473!1.13e-12!8;UBERON:0001301!2.63e-12!1;UBERON:0001000!2.93e-12!1;UBERON:0005352!2.93e-12!1;UBERON:0000998!5.62e-12!1;UBERON:0006868!5.62e-12!1;UBERON:0005156!3.28e-08!59;UBERON:0000990!3.28e-08!59;UBERON:0003133!1.15e-07!48;UBERON:0001003!3.05e-07!14;UBERON:0007376!3.05e-07!14;UBERON:0007383!3.05e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.54e-48;11!UBERON:0006947;5.00e-45;3!UBERON:0004054;5.00e-45;3!UBERON:0001301;1.84e-34;1!UBERON:0001000;2.58e-34;1!UBERON:0005352;2.58e-34;1!UBERON:0005904;4.28e-34;4!UBERON:0003101;1.43e-24;22!UBERON:0000079;1.43e-24;22!UBERON:0000473;1.85e-17;8!UBERON:0000058;2.49e-14;10!UBERON:0003133;7.16e-09;44!UBERON:0004175;2.44e-07;21!UBERON:0000991;2.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.54e-48,11;UBERON:0006947,5.00e-45,3;UBERON:0004054,5.00e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,2.58e-34,1;UBERON:0005352,2.58e-34,1;UBERON:0005904,4.28e-34,4;UBERON:0003101,1.43e-24,22;UBERON:0000079,1.43e-24,22;UBERON:0000473,1.85e-17,8;UBERON:0003133,1.29e-11,48;UBERON:0005156,1.49e-09,59;UBERON:0000990,1.49e-09,59;UBERON:0000058,5.16e-08,19;UBERON:0000991,2.86e-07,21;UBERON:0009196,2.86e-07,21;UBERON:0009117,2.86e-07,21;UBERON:0005564,2.86e-07,21;UBERON:0004176,5.57e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.537788769335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1549.47609397032,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1394686380812,3.7514978221865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.537788769335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1549.47609397032,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1394686380812,3.7514978221865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@DEFB126 | |short_description=p1@DEFB126 | ||
}} | }} |
Latest revision as of 04:13, 20 September 2015
Short description: | p1@DEFB126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DEFB126_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -10bp_to_NM_030931, uc002wcx.2_5end |
EntrezGene: | DEFB126 |
HGNC: | 15900 |
UniProt: | Q9BYW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.54e-48 | 11 |
male genital duct | 5.00e-45 | 3 |
internal male genitalia | 5.00e-45 | 3 |
epididymis | 1.84e-34 | 1 |
vas deferens | 2.58e-34 | 1 |
spermatic cord | 2.58e-34 | 1 |
duct of male reproductive system | 4.28e-34 | 4 |
male organism | 1.43e-24 | 22 |
male reproductive system | 1.43e-24 | 22 |
testis | 1.85e-17 | 8 |
reproductive organ | 1.29e-11 | 48 |
reproductive structure | 1.49e-09 | 59 |
reproductive system | 1.49e-09 | 59 |
duct | 5.16e-08 | 19 |
gonad | 2.86e-07 | 21 |
indifferent external genitalia | 2.86e-07 | 21 |
indifferent gonad | 2.86e-07 | 21 |
gonad primordium | 2.86e-07 | 21 |
external genitalia | 5.57e-07 | 22 |