FFCP PHASE1:Hg19::chr6:138428975..138428985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64065 | |EntrezGene=64065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17637 | |HGNC=17637 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FX8 | |UniProt=Q96FX8 | ||
|association_with_transcript=-315bp_to_NM_022121,uc003qht.2_5end | |association_with_transcript=-315bp_to_NM_022121,uc003qht.2_5end | ||
|cluster_id=chr6:138428975..138428985,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_13_at_PERP_5end | |description=CAGE_peak_13_at_PERP_5end | ||
|id=chr6:138428975..138428985,- | |id=chr6:138428975..138428985,- | ||
|ontology_enrichment_celltype=CL:0000223!9.66e-10!59;CL:0002535!8.62e-08!2;CL:0000181!3.53e-07!12;CL:0000417!3.53e-07!12;CL:0000668!3.53e-07!12;CL:0000414!3.53e-07!12;CL:0000412!3.53e-07!12;CL:0000182!3.53e-07!12 | |ontology_enrichment_celltype=CL:0000223!9.66e-10!59;CL:0002535!8.62e-08!2;CL:0000181!3.53e-07!12;CL:0000417!3.53e-07!12;CL:0000668!3.53e-07!12;CL:0000414!3.53e-07!12;CL:0000412!3.53e-07!12;CL:0000182!3.53e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.69e-21;2!CL:0002563;3.42e-11;4!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.70e-21,2;CL:0002563,3.42e-11,4;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:4362!1.89e-11!5;DOID:0050687!1.21e-09!143;DOID:305!4.33e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:5409;2.80e-11;4!DOID:0050615;5.28e-11;16!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.62e-41,1;DOID:1357,6.62e-41,1;DOID:5409,2.80e-11,4;DOID:0050615,5.28e-11,16;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.52e-09!6;UBERON:0001560!1.52e-09!6;UBERON:0006955!8.62e-08!2;UBERON:0004801!8.62e-08!2;UBERON:0001007!1.66e-07!155;UBERON:0001555!1.66e-07!155;UBERON:0007026!1.66e-07!155;UBERON:0004119!3.92e-07!169;UBERON:0000925!3.92e-07!169;UBERON:0006595!3.92e-07!169;UBERON:0000995!4.25e-07!21;UBERON:0005795!9.92e-07!22;UBERON:0003975!9.92e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0001052;3.42e-11;4!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0004907;3.22e-09;5!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.62e-41,1;UBERON:0001825,6.62e-41,1;UBERON:0001052,3.42e-11,4;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0004907,3.22e-09,5 | |||
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| ||
|short_description=p13@PERP | |short_description=p13@PERP | ||
}} | }} |
Latest revision as of 04:41, 25 September 2015
Short description: | p13@PERP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PERP_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -315bp_to_NM_022121, uc003qht.2_5end |
EntrezGene: | PERP |
HGNC: | 17637 |
UniProt: | Q96FX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.70e-21 | 2 |
intestinal epithelial cell | 3.42e-11 | 4 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.62e-41 | 1 |
paranasal sinus | 6.62e-41 | 1 |
rectum | 3.42e-11 | 4 |
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
lower digestive tract | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.62e-41 | 1 |
maxillary sinus cancer | 6.62e-41 | 1 |
lung small cell carcinoma | 2.80e-11 | 4 |
respiratory system cancer | 5.28e-11 | 16 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |