FFCP PHASE1:Hg19::chr1:89488105..89488112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000498904_5end | |association_with_transcript=-67bp_to_ENST00000498904_5end | ||
|cluster_id=chr1:89488105..89488112,+ | |||
|description=CAGE_peak_1_at_ENST00000498904_5end | |description=CAGE_peak_1_at_ENST00000498904_5end | ||
|id=chr1:89488105..89488112,+ | |id=chr1:89488105..89488112,+ | ||
|ontology_enrichment_celltype=CL:0002150!8.92e-07!3;CL:0000861!8.92e-07!3 | |ontology_enrichment_celltype=CL:0002150!8.92e-07!3;CL:0000861!8.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.50e-10;2!CL:0000322;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.43e-10,2;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.48e-10;2!UBERON:0008947;2.50e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.97e-07!155;UBERON:0001555!4.97e-07!155;UBERON:0007026!4.97e-07!155;UBERON:0004119!6.70e-07!169;UBERON:0000925!6.70e-07!169;UBERON:0006595!6.70e-07!169 | |ontology_enrichment_uberon=UBERON:0001007!4.97e-07!155;UBERON:0001555!4.97e-07!155;UBERON:0007026!4.97e-07!155;UBERON:0004119!6.70e-07!169;UBERON:0000925!6.70e-07!169;UBERON:0006595!6.70e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.71e-19;1!UBERON:0006518;2.71e-19;1!UBERON:0008949;2.71e-19;1!UBERON:0000101;2.71e-19;1!UBERON:0002167;2.71e-19;1!UBERON:0003127;1.50e-10;2!UBERON:0000341;2.48e-10;2!UBERON:0004903;2.48e-10;2!UBERON:0002173;2.48e-10;2!UBERON:0002186;2.48e-10;2!UBERON:0002048;5.52e-08;22!UBERON:0000117;5.52e-08;22!UBERON:0000171;5.52e-08;22!UBERON:0000170;5.52e-08;22!UBERON:0004821;2.63e-07;3!UBERON:0007499;2.63e-07;3!UBERON:0003215;2.63e-07;3!UBERON:0010368;2.63e-07;3!UBERON:0009911;2.63e-07;3!UBERON:0002299;2.63e-07;3!UBERON:0006524;2.63e-07;3!UBERON:0008874;2.63e-07;3!UBERON:0002169;2.63e-07;3!UBERON:0004894;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.91e-19,1;UBERON:0006518,3.91e-19,1;UBERON:0008949,3.91e-19,1;UBERON:0000101,3.91e-19,1;UBERON:0002167,3.91e-19,1;UBERON:0003127,1.57e-10,2;UBERON:0000341,2.49e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0005178,8.36e-09,34;UBERON:0002224,8.36e-09,34;UBERON:0005181,1.46e-08,35;UBERON:0002048,6.23e-08,22;UBERON:0000117,6.23e-08,22;UBERON:0000171,6.23e-08,22;UBERON:0000170,6.23e-08,22;UBERON:0005597,6.23e-08,22;UBERON:0000118,6.23e-08,22;UBERON:0008947,6.60e-08,38;UBERON:0003258,6.60e-08,38;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,1.94826728407911,0,0,0,0,0,0,0.328875809207352,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.506039384039006,0,0.651083453856419,0,0,0.255973222308837,0,0.473554504088034,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.854738209659,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,1.57204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0,0,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0.655678681511872,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0.481448200135009,0,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0.952257725854961,0.0645889098360061,0.124149428591716,0.112131862580613,0.190941474834495,0,0.217716747896961,0,0.0673520530145875,3.22749924267044,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@ENST00000498904 | |short_description=p1@ENST00000498904 | ||
}} | }} |
Latest revision as of 11:03, 28 July 2015
Short description: | p1@ENST00000498904 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000498904_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000498904_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.43e-10 | 2 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.91e-19 | 1 |
right lung lobe | 3.91e-19 | 1 |
lower lobe of lung | 3.91e-19 | 1 |
lobe of lung | 3.91e-19 | 1 |
right lung | 3.91e-19 | 1 |
open tracheal system trachea | 1.57e-10 | 2 |
throat | 2.49e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
thoracic cavity element | 8.36e-09 | 34 |
thoracic cavity | 8.36e-09 | 34 |
thoracic segment organ | 1.46e-08 | 35 |
lung | 6.23e-08 | 22 |
respiratory tube | 6.23e-08 | 22 |
respiration organ | 6.23e-08 | 22 |
pair of lungs | 6.23e-08 | 22 |
lung primordium | 6.23e-08 | 22 |
lung bud | 6.23e-08 | 22 |
respiratory primordium | 6.60e-08 | 38 |
endoderm of foregut | 6.60e-08 | 38 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.58e-10 | 2 |