FFCP PHASE1:Hg19::chr6:122974486..122974510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:122974486..122974510,+ | |||
|coexpression_cluster_id=C601 | |||
|description=CAGE_peak_at_chr6:122974486..122974510,+ | |description=CAGE_peak_at_chr6:122974486..122974510,+ | ||
|id=chr6:122974486..122974510,+ | |id=chr6:122974486..122974510,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.11e-15!254;CL:0002166!4.16e-10!3 | |ontology_enrichment_celltype=CL:0000066!2.11e-15!254;CL:0002166!4.16e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000342;5.70e-13;1!CL:0002565;5.70e-13;1!CL:0002563;8.92e-13;4!CL:0002537;2.97e-10;5!CL:0002076;3.77e-07;42!CL:0002097;4.04e-07;2!CL:0002253;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,8.64e-13,1;CL:0002565,8.64e-13,1;CL:0002563,8.67e-13,4;CL:0002537,2.47e-10,5;CL:0002253,3.70e-07,2;CL:0002097,3.93e-07,2;CL:0002076,6.16e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!3.17e-11!25;DOID:305!1.23e-10!106;DOID:0050687!3.54e-07!143;DOID:1324!8.23e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:299;1.15e-11;25!DOID:4468;4.04e-07;2!DOID:3493;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,8.53e-12,25;DOID:3493,2.91e-07,2;DOID:4468,3.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009569!3.07e-09!113;UBERON:0005911!1.45e-08!82;UBERON:0005153!8.99e-08!37;UBERON:0001708!1.13e-07!4;UBERON:0001704!1.13e-07!4;UBERON:0002100!1.23e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;5.70e-13;1!UBERON:0001769;5.70e-13;1!UBERON:0001242;8.92e-13;4!UBERON:0001262;8.92e-13;4!UBERON:0004786;8.92e-13;4!UBERON:0004808;8.92e-13;4!UBERON:0001277;8.92e-13;4!UBERON:0005631;4.69e-11;10!UBERON:0000158;4.69e-11;10!UBERON:0005409;2.15e-08;22!UBERON:0000485;1.11e-07;7!UBERON:0003929;1.11e-07;7!UBERON:0000305;1.42e-07;7!UBERON:0003350;7.99e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,8.64e-13,1;UBERON:0001769,8.64e-13,1;UBERON:0001242,8.67e-13,4;UBERON:0001262,8.67e-13,4;UBERON:0004786,8.67e-13,4;UBERON:0004808,8.67e-13,4;UBERON:0001277,8.67e-13,4;UBERON:0005631,4.94e-08,14;UBERON:0000158,4.94e-08,14;UBERON:0000305,1.25e-07,7;UBERON:0005409,1.86e-07,25;UBERON:0003350,7.88e-07,8;UBERON:0004871,8.85e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33678033231916,1.20097467208968,0.548751427043128,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,5.62403003920662,0.503946384596579,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,1.0877350463246,0.200506470303285,0,0,0,0,0,0.385076685522074,0,0,1.37217117560738,0,0,0,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,1.84296421259539,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,1.68798451622422,0,1.55488378577335,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9226682220855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,1.58499458869517,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9084762440336,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55832224351759,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,1.95068679971631,0,0,0,0,0,0,0,0,0,0,1.389134845943,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:122974486..122974510,+ | |short_description=p@chr6:122974486..122974510,+ | ||
}} | }} |
Latest revision as of 18:57, 30 July 2015
Short description: | p@chr6:122974486..122974510, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:122974486..122974510, + |
Coexpression cluster: | C601_endometrial_clear_thyroid_kidney_Renal_serous_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 8.64e-13 | 1 |
iris pigment epithelial cell | 8.64e-13 | 1 |
intestinal epithelial cell | 8.67e-13 | 4 |
amnion mesenchymal stem cell | 2.47e-10 | 5 |
epithelial cell of large intestine | 3.70e-07 | 2 |
cortical cell of adrenal gland | 3.93e-07 | 2 |
endo-epithelial cell | 6.16e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 8.64e-13 | 1 |
iris | 8.64e-13 | 1 |
intestinal mucosa | 8.67e-13 | 4 |
wall of intestine | 8.67e-13 | 4 |
gastrointestinal system mucosa | 8.67e-13 | 4 |
gastrointestinal system epithelium | 8.67e-13 | 4 |
intestinal epithelium | 8.67e-13 | 4 |
extraembryonic membrane | 4.94e-08 | 14 |
membranous layer | 4.94e-08 | 14 |
amnion | 1.25e-07 | 7 |
gastrointestinal system | 1.86e-07 | 25 |
epithelium of mucosa | 7.88e-07 | 8 |
somatic layer of lateral plate mesoderm | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.53e-12 | 25 |
signet ring cell adenocarcinoma | 2.91e-07 | 2 |
clear cell adenocarcinoma | 3.28e-07 | 2 |