FFCP PHASE1:Hg19::chr12:95611569..95611608,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:95611569..95611608,+
|short_description=p1@VEZT
|description=CAGE_peak_1_at_VEZT_5end
|association_with_transcript=0bp_to_ENST00000261219,ENST00000546398,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55591 | |EntrezGene=55591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18258 | |HGNC=18258 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3A6,F8W088,F8VUB7,F8VUG0,F8VRY3,F8VXA0,F8VS43,F8W048 | |UniProt=F2Z3A6,F8W088,F8VUB7,F8VUG0,F8VRY3,F8VXA0,F8VS43,F8W048 | ||
|association_with_transcript=0bp_to_ENST00000261219,ENST00000546398,ENST00000547484,ENST00000548245,ENST00000548455,ENST00000548822,ENST00000548838,ENST00000549192,ENST00000549624,ENST00000551039,ENST00000551472,ENST00000551792,ENST00000551994,ENST00000552031,ENST00000552626,ENST00000552660,ENST00000552821,ENST00000553063_5end | |||
|cluster_id=chr12:95611569..95611608,+ | |||
|description=CAGE_peak_1_at_VEZT_5end | |||
|id=chr12:95611569..95611608,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.08e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.08e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.91e-11!82;UBERON:0002780!6.59e-11!41;UBERON:0001890!6.59e-11!41;UBERON:0006240!6.59e-11!41;UBERON:0000073!3.17e-10!94;UBERON:0001016!3.17e-10!94;UBERON:0003080!3.55e-10!42;UBERON:0005743!9.15e-10!86;UBERON:0001049!5.35e-09!57;UBERON:0005068!5.35e-09!57;UBERON:0006241!5.35e-09!57;UBERON:0007135!5.35e-09!57;UBERON:0001869!5.75e-09!32;UBERON:0001893!1.47e-08!34;UBERON:0000955!1.64e-08!69;UBERON:0006238!1.64e-08!69;UBERON:0002616!1.93e-08!59;UBERON:0002020!2.62e-08!34;UBERON:0003528!2.62e-08!34;UBERON:0002791!3.12e-08!33;UBERON:0000924!4.41e-08!173;UBERON:0006601!4.41e-08!173;UBERON:0004121!1.79e-07!169;UBERON:0000956!2.35e-07!25;UBERON:0000203!2.35e-07!25;UBERON:0002619!3.44e-07!22;UBERON:0007023!4.55e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-08;32!UBERON:0002780;6.96e-08;41!UBERON:0001890;6.96e-08;41!UBERON:0002791;7.74e-08;32!UBERON:0003528;1.25e-07;34!UBERON:0002020;1.25e-07;34!UBERON:0001893;1.35e-07;34!UBERON:0000956;2.19e-07;25!UBERON:0000203;2.19e-07;25!UBERON:0002619;3.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.27e-12,89;UBERON:0001017,1.84e-11,81;UBERON:0011216,5.65e-11,223;UBERON:0002780,6.59e-11,41;UBERON:0001890,6.59e-11,41;UBERON:0003080,6.59e-11,41;UBERON:0006240,6.59e-11,41;UBERON:0001049,1.49e-09,56;UBERON:0005068,1.49e-09,56;UBERON:0006241,1.49e-09,56;UBERON:0007135,1.49e-09,56;UBERON:0000073,1.90e-09,53;UBERON:0002616,1.90e-09,53;UBERON:0000955,5.56e-09,68;UBERON:0006238,5.56e-09,68;UBERON:0001869,5.75e-09,32;UBERON:0004121,1.40e-08,171;UBERON:0000924,1.40e-08,171;UBERON:0006601,1.40e-08,171;UBERON:0001893,1.47e-08,34;UBERON:0002791,1.84e-08,32;UBERON:0003528,2.62e-08,34;UBERON:0002020,2.62e-08,34;UBERON:0000956,2.35e-07,25;UBERON:0000203,2.35e-07,25;UBERON:0002619,3.44e-07,22;UBERON:0007023,7.83e-07,114 | |||
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|short_description=p1@VEZT | |||
}} | }} |
Latest revision as of 02:18, 16 September 2015
Short description: | p1@VEZT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VEZT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261219, ENST00000546398, ENST00000547484, ENST00000548245, ENST00000548455, ENST00000548822, ENST00000548838, ENST00000549192, ENST00000549624, ENST00000551039, ENST00000551472, ENST00000551792, ENST00000551994, ENST00000552031, ENST00000552626, ENST00000552660, ENST00000552821, ENST00000553063_5end |
EntrezGene: | VEZT |
HGNC: | 18258 |
UniProt: | F2Z3A6F8W088F8VUB7F8VUG0F8VRY3F8VXA0F8VS43F8W048 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 7.27e-12 | 89 |
central nervous system | 1.84e-11 | 81 |
organ system subdivision | 5.65e-11 | 223 |
regional part of forebrain | 6.59e-11 | 41 |
forebrain | 6.59e-11 | 41 |
anterior neural tube | 6.59e-11 | 41 |
future forebrain | 6.59e-11 | 41 |
neural tube | 1.49e-09 | 56 |
neural rod | 1.49e-09 | 56 |
future spinal cord | 1.49e-09 | 56 |
neural keel | 1.49e-09 | 56 |
regional part of nervous system | 1.90e-09 | 53 |
regional part of brain | 1.90e-09 | 53 |
brain | 5.56e-09 | 68 |
future brain | 5.56e-09 | 68 |
cerebral hemisphere | 5.75e-09 | 32 |
ectoderm-derived structure | 1.40e-08 | 171 |
ectoderm | 1.40e-08 | 171 |
presumptive ectoderm | 1.40e-08 | 171 |
telencephalon | 1.47e-08 | 34 |
regional part of telencephalon | 1.84e-08 | 32 |
brain grey matter | 2.62e-08 | 34 |
gray matter | 2.62e-08 | 34 |
cerebral cortex | 2.35e-07 | 25 |
pallium | 2.35e-07 | 25 |
regional part of cerebral cortex | 3.44e-07 | 22 |
adult organism | 7.83e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.08e-07 | 106 |