FFCP PHASE1:Hg19::chr1:78383815..78383829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_uc001dif.1_5end | |association_with_transcript=5bp_to_uc001dif.1_5end | ||
|cluster_id=chr1:78383815..78383829,+ | |||
|coexpression_cluster_id=C933 | |||
|description=CAGE_peak_12_at_NEXN_5end | |description=CAGE_peak_12_at_NEXN_5end | ||
|id=chr1:78383815..78383829,+ | |id=chr1:78383815..78383829,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.48e-07!75 | |ontology_enrichment_celltype=CL:0000057!1.48e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002195;7.55e-11;2!CL:0002571;7.55e-11;2!CL:0000746;2.10e-07;3!CL:0002615;4.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.23e-11,2;CL:0002571,7.23e-11,2;CL:0000746,2.47e-07,3;CL:0000513,2.47e-07,3;CL:0002615,5.72e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.39e-11;4!UBERON:0007284;1.39e-11;4!CL:0000513;2.10e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!8.30e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.42e-09!365;UBERON:0000468!9.96e-09!659;UBERON:0000481!1.46e-08!347;UBERON:0003102!2.02e-07!95;UBERON:0000914!3.60e-07!83;UBERON:0002329!3.60e-07!83;UBERON:0003077!3.60e-07!83;UBERON:0003059!3.60e-07!83;UBERON:0007282!3.60e-07!83;UBERON:0009618!3.60e-07!83;UBERON:0007285!3.60e-07!83;UBERON:0005256!4.36e-07!143;UBERON:0007100!5.63e-07!27 | |ontology_enrichment_uberon=UBERON:0000475!5.42e-09!365;UBERON:0000468!9.96e-09!659;UBERON:0000481!1.46e-08!347;UBERON:0003102!2.02e-07!95;UBERON:0000914!3.60e-07!83;UBERON:0002329!3.60e-07!83;UBERON:0003077!3.60e-07!83;UBERON:0003059!3.60e-07!83;UBERON:0007282!3.60e-07!83;UBERON:0009618!3.60e-07!83;UBERON:0007285!3.60e-07!83;UBERON:0005256!4.36e-07!143;UBERON:0007100!5.63e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.79e-15;3!UBERON:0000946;2.79e-15;3!UBERON:0004151;3.14e-15;3!UBERON:0005090;3.36e-11;2!UBERON:0001630;3.36e-11;2!UBERON:0007100;4.41e-11;25!UBERON:0002081;1.71e-10;2!UBERON:0002133;1.71e-10;2!UBERON:0000948;6.78e-10;22!UBERON:0001723;2.89e-07;3!UBERON:0001033;2.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.67e-15,3;UBERON:0009751,2.67e-15,3;UBERON:0000946,2.67e-15,3;UBERON:0002523,2.67e-15,3;UBERON:0005983,2.67e-15,3;UBERON:0002165,2.67e-15,3;UBERON:0002062,2.67e-15,3;UBERON:0007280,2.67e-15,3;UBERON:0004151,2.94e-15,3;UBERON:0005090,3.30e-11,2;UBERON:0001630,3.30e-11,2;UBERON:0002081,1.56e-10,2;UBERON:0010227,1.56e-10,2;UBERON:0002133,1.64e-10,2;UBERON:0007100,4.23e-10,27;UBERON:0000948,5.87e-09,24;UBERON:0005498,5.87e-09,24;UBERON:0004140,5.87e-09,24;UBERON:0009881,5.87e-09,24;UBERON:0004141,5.87e-09,24;UBERON:0003084,5.87e-09,24;UBERON:0007005,5.87e-09,24;UBERON:0004139,5.87e-09,24;UBERON:0004291,5.87e-09,24;UBERON:0001723,2.72e-07,3;UBERON:0001033,2.72e-07,3;UBERON:0010056,2.72e-07,3;UBERON:0004797,8.42e-07,7 | |||
|phase1_expression=0.363356758541113,2.35510576280081,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,4.38186054232424,0.975865597581014,0,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,0.255725123687061,0,0,0.869079113764942,0,0,0.0945348171640679,0.886917589850256,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0,1.34503812496621,0,0,0,0.61246251376468,0.368502951935304,0.206651562351531,0,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.600952235626387,0.226864366320042,0.717558542755448,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,1.85747171212792,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,2.43062589218851,0.542621605391443,0,0,2.13235169245527,0,0,0.871533458600294,1.09970290300263,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,1.78428988797162,0.630809660135739,0.702848489956279,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0,1.84154367945675,0,0.256278298511402,0,0.804269605718038,0,0.462629081407967,0.532685175939381,0.164254312027618,1.55776328755086,0,0,0.40101294060657,0.0920809889358963,0.34444334449382,0.546273504020151,0.524497659837696,0,0.15403067420883,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0.732555718546747,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,0.725083469571143,0.511359764496605,0.534192213880424,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0.38126038784765,0,1.71175595213568,0,0,0.539617372749944,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.989838023675989,0,0,0,0,0,0.655894752046633,0,0.92947049429925,0,0.286822704408103,0.687743287091848,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0,0,0,0,0,0,0,0.211125408127993,1.59398390600856,0,0,0,0,0.933118762985422,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0.678923115418936,0,1.12990370390266,0.137041924646751,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0.273810757783986,0,0,0,1.39641200636127,10.7705399285491,2.87149209830726,0,1.28767814440971,0.446342914883745,0.873385142327441,1.80149941771202,0,0,0,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0.191915197319445,1.42939065274673,6.62091970365432,0.25426853765475,0,0,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,1.77962244319307,0,0.151230923763239,0.466311601748341,0.147855149989634,0.477890301491107,0.449803112163605,0,0.829412415681711,0,1.04349012362347,0.601030435988874,0.761610424337591,1.62748293281865,0.181848659202559,0.214821114084977,0.464033759878494,1.59238355479446,3.20022211730523,0,0,0,0,0.214441591374926,0,0.453411851024545,0.231522474323834,0,0.895444205407437,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0.366857197043358,0,0,0,0.198916222116275,0.0752103283492573,0.80682027481408,0,0,0,0,0,0,0.206686796501184,0,0,0,6.94695649745012,0,0,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| ||
|short_description=p12@NEXN | |short_description=p12@NEXN | ||
}} | }} |
Latest revision as of 07:40, 19 September 2015
Short description: | p12@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NEXN_5end |
Coexpression cluster: | C933_skeletal_heart_left_penis_Cardiac_Preadipocyte_tongue |
Association with transcript: | 5bp_to_uc001dif.1_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.23e-11 | 2 |
hepatic mesenchymal stem cell | 7.23e-11 | 2 |
cardiac muscle cell | 2.47e-07 | 3 |
cardiac muscle myoblast | 2.47e-07 | 3 |
adipocyte of omentum tissue | 5.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 2.67e-15 | 3 |
cardiac mesenchyme | 2.67e-15 | 3 |
cardial valve | 2.67e-15 | 3 |
tunica intima | 2.67e-15 | 3 |
heart layer | 2.67e-15 | 3 |
endocardium | 2.67e-15 | 3 |
endocardial cushion | 2.67e-15 | 3 |
presumptive endocardium | 2.67e-15 | 3 |
cardiac chamber | 2.94e-15 | 3 |
muscle structure | 3.30e-11 | 2 |
muscle organ | 3.30e-11 | 2 |
cardiac atrium | 1.56e-10 | 2 |
future cardiac atrium | 1.56e-10 | 2 |
atrioventricular valve | 1.64e-10 | 2 |
primary circulatory organ | 4.23e-10 | 27 |
heart | 5.87e-09 | 24 |
primitive heart tube | 5.87e-09 | 24 |
primary heart field | 5.87e-09 | 24 |
anterior lateral plate mesoderm | 5.87e-09 | 24 |
heart tube | 5.87e-09 | 24 |
heart primordium | 5.87e-09 | 24 |
cardiac mesoderm | 5.87e-09 | 24 |
cardiogenic plate | 5.87e-09 | 24 |
heart rudiment | 5.87e-09 | 24 |
tongue | 2.72e-07 | 3 |
gustatory system | 2.72e-07 | 3 |
future tongue | 2.72e-07 | 3 |
blood vessel layer | 8.42e-07 | 7 |