FFCP PHASE1:Hg19::chr1:75602129..75602140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=431707 | |EntrezGene=431707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28838 | |HGNC=28838 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-435bp_to_ENST00000559413_5end | |association_with_transcript=-435bp_to_ENST00000559413_5end | ||
|cluster_id=chr1:75602129..75602140,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_6_at_LHX8_5end | |description=CAGE_peak_6_at_LHX8_5end | ||
|id=chr1:75602129..75602140,+ | |id=chr1:75602129..75602140,+ | ||
|ontology_enrichment_celltype=CL:0002556!2.71e-21!6;CL:0002580!1.66e-16!3;CL:0002552!1.09e-09!5;CL:0000057!9.67e-09!75;CL:0002334!4.59e-07!12 | |ontology_enrichment_celltype=CL:0002556!2.71e-21!6;CL:0002580!1.66e-16!3;CL:0002552!1.09e-09!5;CL:0000057!9.67e-09!75;CL:0002334!4.59e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.71e-14;3!CL:0002580;1.71e-14;3!CL:0000039;5.86e-07;7!CL:0000586;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.83e-14,3;CL:0002615,2.09e-14,3;CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease=DOID:1909!8.17e-12!2 | |ontology_enrichment_disease=DOID:1909!8.17e-12!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.81e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!2.71e-21!6;UBERON:0003672!2.71e-21!6;UBERON:0000165!4.43e-13!28;UBERON:0000930!4.43e-13!28;UBERON:0003129!1.64e-11!11;UBERON:0000075!1.06e-09!13;UBERON:0005944!1.06e-09!13;UBERON:0004288!1.06e-09!13;UBERON:0003089!1.06e-09!13;UBERON:0000078!1.40e-09!18;UBERON:0001444!9.21e-09!48;UBERON:0000310!1.70e-08!10;UBERON:0005383!8.93e-08!3;UBERON:0005382!8.93e-08!3;UBERON:0001443!1.00e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0003688;6.55e-08;6!UBERON:0002358;6.55e-08;6!UBERON:0003684;6.55e-08;6!UBERON:0001178;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6 | |||
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|short_description=p6@LHX8 | |short_description=p6@LHX8 | ||
}} | }} |
Latest revision as of 05:45, 19 September 2015
Short description: | p6@LHX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LHX8_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -435bp_to_ENST00000559413_5end |
EntrezGene: | LHX8 |
HGNC: | 28838 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.83e-14 | 3 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
germ line cell | 5.70e-07 | 7 |
germ cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.81e-21 | 2 |