FFCP PHASE1:Hg19::chr1:73570457..73570463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33373 | |HGNC=33373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000430398_5end | |association_with_transcript=-11bp_to_ENST00000430398_5end | ||
|cluster_id=chr1:73570457..73570463,+ | |||
|description=CAGE_peak_1_at_KRT8P21_5end | |description=CAGE_peak_1_at_KRT8P21_5end | ||
|id=chr1:73570457..73570463,+ | |id=chr1:73570457..73570463,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.24e-29!254;CL:0000077!5.74e-12!19;CL:0000223!2.83e-10!59;CL:0002076!1.37e-07!43;CL:0000220!6.30e-07!246;CL:0002321!8.96e-07!248 | |ontology_enrichment_celltype=CL:0000066!3.24e-29!254;CL:0000077!5.74e-12!19;CL:0000223!2.83e-10!59;CL:0002076!1.37e-07!43;CL:0000220!6.30e-07!246;CL:0002321!8.96e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.35e-13;4!CL:0000731;2.35e-13;4!CL:0000077;6.97e-11;19!CL:0000650;1.64e-07;2!CL:1000500;1.64e-07;2!CL:1000618;1.64e-07;2!CL:1001318;1.64e-07;2!CL:0002173;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.51e-13,4;CL:0000731,2.51e-13,4;CL:0000077,6.89e-11,19;CL:0000650,1.87e-07,2;CL:1000500,1.87e-07,2;CL:1000618,1.87e-07,2;CL:1001318,1.87e-07,2;CL:0002173,1.87e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.20e-19!106;DOID:0050687!2.02e-16!143;DOID:162!3.21e-13!235;DOID:14566!1.32e-12!239;DOID:299!8.10e-11!25 | |ontology_enrichment_disease=DOID:305!3.20e-19!106;DOID:0050687!2.02e-16!143;DOID:162!3.21e-13!235;DOID:14566!1.32e-12!239;DOID:299!8.10e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.35e-13;4!DOID:1612;2.35e-13;4!DOID:3493;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.02e-13,4;DOID:1612,3.02e-13,4;DOID:3493,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003124!1.63e-09!7;UBERON:0000077!1.90e-09!130;UBERON:0005631!2.03e-09!14;UBERON:0000158!2.03e-09!14;UBERON:0004119!6.09e-09!169;UBERON:0000925!6.09e-09!169;UBERON:0006595!6.09e-09!169;UBERON:0004921!1.46e-08!129;UBERON:0004185!1.46e-08!129;UBERON:0001041!1.00e-07!98;UBERON:0006554!2.41e-07!44;UBERON:0003104!2.53e-07!238;UBERON:0009142!2.53e-07!238;UBERON:0005172!3.66e-07!55;UBERON:0005173!3.66e-07!55;UBERON:0005177!3.78e-07!107;UBERON:0001008!4.33e-07!45;UBERON:0001007!8.93e-07!155;UBERON:0001555!8.93e-07!155;UBERON:0007026!8.93e-07!155;UBERON:0002113!9.32e-07!27;UBERON:0003918!9.32e-07!27;UBERON:0005095!9.32e-07!27;UBERON:0007687!9.32e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.13e-11;5!UBERON:0005910;3.27e-09;6!UBERON:0003567;1.64e-07;2!UBERON:0003838;1.64e-07;2!UBERON:0003586;1.64e-07;2!UBERON:0005169;1.64e-07;2!UBERON:0002321;1.64e-07;2!UBERON:0005215;1.64e-07;2!UBERON:0002303;1.64e-07;2!UBERON:0002319;1.64e-07;2!UBERON:0006554;7.52e-07;30!UBERON:0001008;7.52e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.51e-11,5;UBERON:0005910,3.42e-09,6;UBERON:0003124,3.84e-08,7;UBERON:0003567,1.87e-07,2;UBERON:0003838,1.87e-07,2;UBERON:0003586,1.87e-07,2;UBERON:0005169,1.87e-07,2;UBERON:0002321,1.87e-07,2;UBERON:0005215,1.87e-07,2;UBERON:0002303,1.87e-07,2;UBERON:0002319,1.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756962552626885,0,0,0,0,0,0,0.828147600278907,0.337169380156203,0.241011029883482,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37585561880029,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,1.50506932156456,0.254876273045038,1.66215201785745,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,1.29151611801369,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0.593929361665277,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.46112780877612,0,0.434589487688032,1.91400695839152,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0,0,0.0730893170861856,0.246346371159628,0,0.0882561266915003,0,0,0,0,0.391102765469606,0,0,0.799238438328521,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.590564889088493,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14241563650639,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,1.81364740409818,3.47283711485751,0.489473409012935,0.179088841081487,2.47041157728778,0.657852148736121,0,1.15748422962549,0.675769762612291,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0.523813388962845,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0.294450700845729,1.5849330247695,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 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| ||
|short_description=p1@KRT8P21 | |short_description=p1@KRT8P21 | ||
}} | }} |
Latest revision as of 04:49, 19 September 2015
Short description: | p1@KRT8P21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT8P21_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000430398_5end |
EntrezGene: | NA |
HGNC: | 33373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.51e-13 | 4 |
urothelial cell | 2.51e-13 | 4 |
mesothelial cell | 6.89e-11 | 19 |
mesangial cell | 1.87e-07 | 2 |
kidney interstitial cell | 1.87e-07 | 2 |
juxtaglomerular complex cell | 1.87e-07 | 2 |
renal interstitial pericyte | 1.87e-07 | 2 |
extraglomerular mesangial cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 7.51e-11 | 5 |
transitional epithelium | 3.42e-09 | 6 |
chorion | 3.84e-08 | 7 |
abdomen connective tissue | 1.87e-07 | 2 |
abdominal segment connective tissue | 1.87e-07 | 2 |
trunk connective tissue | 1.87e-07 | 2 |
interstitial tissue | 1.87e-07 | 2 |
extraglomerular mesangium | 1.87e-07 | 2 |
kidney interstitium | 1.87e-07 | 2 |
juxtaglomerular apparatus | 1.87e-07 | 2 |
mesangium | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.02e-13 | 4 |
breast cancer | 3.02e-13 | 4 |
signet ring cell adenocarcinoma | 1.64e-07 | 2 |