FFCP PHASE1:Hg19::chr1:6884943..6884957,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23261 | |EntrezGene=23261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18806 | |HGNC=18806 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-212bp_to_ENST00000482934_5end | |association_with_transcript=-212bp_to_ENST00000482934_5end | ||
|cluster_id=chr1:6884943..6884957,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_7_at_CAMTA1_5end | |description=CAGE_peak_7_at_CAMTA1_5end | ||
|id=chr1:6884943..6884957,+ | |id=chr1:6884943..6884957,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.24e-23;24!CL:0002593;2.59e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.16e-23,24;CL:0000826,3.16e-23,24;CL:0002593,2.32e-12,2;CL:0000838,7.57e-11,52;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.28e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2355;5.73e-23;1!DOID:74;3.43e-12;2!DOID:0060058;1.03e-09;10!DOID:1287;9.90e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.13e-23,1;DOID:74,3.24e-12,2;DOID:0060058,1.01e-09,10;DOID:1287,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.86e-18!115;UBERON:0002240!4.94e-10!3;UBERON:0001049!6.48e-10!57;UBERON:0005068!6.48e-10!57;UBERON:0006241!6.48e-10!57;UBERON:0007135!6.48e-10!57;UBERON:0005743!5.94e-09!86;UBERON:0002346!1.55e-08!90;UBERON:0001017!1.60e-08!82;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0000073!1.13e-07!94;UBERON:0001016!1.13e-07!94;UBERON:0002360!1.87e-07!2;UBERON:0000094!1.87e-07!2;UBERON:0007645!1.87e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!3.86e-18!115;UBERON:0002240!4.94e-10!3;UBERON:0001049!6.48e-10!57;UBERON:0005068!6.48e-10!57;UBERON:0006241!6.48e-10!57;UBERON:0007135!6.48e-10!57;UBERON:0005743!5.94e-09!86;UBERON:0002346!1.55e-08!90;UBERON:0001017!1.60e-08!82;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0000073!1.13e-07!94;UBERON:0001016!1.13e-07!94;UBERON:0002360!1.87e-07!2;UBERON:0000094!1.87e-07!2;UBERON:0007645!1.87e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.28e-23;1!UBERON:0002360;2.59e-12;2!UBERON:0000094;2.59e-12;2!UBERON:0002456;2.59e-12;2!UBERON:0010743;2.59e-12;2!UBERON:0002106;1.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,4.10e-23,1;UBERON:0007645,4.10e-23,1;UBERON:0007647,4.10e-23,1;UBERON:0010115,4.10e-23,1;UBERON:0002456,2.32e-12,2;UBERON:0002360,2.90e-12,2;UBERON:0000094,2.90e-12,2;UBERON:0010743,2.90e-12,2;UBERON:0002106,1.21e-08,3;UBERON:0004854,1.21e-08,3;UBERON:0009034,1.21e-08,3;UBERON:0002095,1.21e-08,3;UBERON:0004782,1.21e-08,3;UBERON:0003281,1.21e-08,3;UBERON:0009664,1.21e-08,3;UBERON:0002296,1.21e-08,3;UBERON:0005602,1.21e-08,3;UBERON:0001179,1.21e-08,3;UBERON:0006293,1.21e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,5.17233713534658,3.14843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,2.68084838594413,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.597743964753209,0,0,0,4.4310529965985,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.370691816839509,0.417687798021821,0.134802265961354,0,0,0,0,0,0,0,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.392616934229891,0.594092800654172,0.8453114551668,0,0,0,2.09876427442351,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0.124149428591716,0,0.445530107947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,5.17233713534658,3.14843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,2.68084838594413,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.597743964753209,0,0,0,4.4310529965985,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.370691816839509,0.417687798021821,0.134802265961354,0,0,0,0,0,0,0,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.392616934229891,0.594092800654172,0.8453114551668,0,0,0,2.09876427442351,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0.124149428591716,0,0.445530107947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p7@CAMTA1 | |short_description=p7@CAMTA1 | ||
}} | }} |
Latest revision as of 03:04, 19 September 2015
Short description: | p7@CAMTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAMTA1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -212bp_to_ENST00000482934_5end |
EntrezGene: | CAMTA1 |
HGNC: | 18806 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.16e-23 | 24 |
pro-B cell | 3.16e-23 | 24 |
smooth muscle cell of the internal thoracic artery | 2.32e-12 | 2 |
lymphoid lineage restricted progenitor cell | 7.57e-11 | 52 |
lymphocyte | 1.20e-10 | 53 |
common lymphoid progenitor | 1.20e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
dura mater | 4.10e-23 | 1 |
future meninx | 4.10e-23 | 1 |
ectomeninx | 4.10e-23 | 1 |
future dura mater | 4.10e-23 | 1 |
internal thoracic artery | 2.32e-12 | 2 |
meninx | 2.90e-12 | 2 |
membrane organ | 2.90e-12 | 2 |
meningeal cluster | 2.90e-12 | 2 |
spleen | 1.21e-08 | 3 |
gastrointestinal system mesentery | 1.21e-08 | 3 |
stomach region | 1.21e-08 | 3 |
mesentery | 1.21e-08 | 3 |
gastrointestinal system serosa | 1.21e-08 | 3 |
mesentery of stomach | 1.21e-08 | 3 |
gut mesentery | 1.21e-08 | 3 |
dorsal mesentery | 1.21e-08 | 3 |
dorsal mesogastrium | 1.21e-08 | 3 |
peritoneal cavity | 1.21e-08 | 3 |
spleen primordium | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.13e-23 | 1 |
hematopoietic system disease | 3.24e-12 | 2 |
lymphoma | 1.01e-09 | 10 |
cardiovascular system disease | 9.63e-07 | 4 |