FFCP PHASE1:Hg19::chr6:10521618..10521627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000489819,uc003mza.2_5end | |association_with_transcript=-25bp_to_ENST00000489819,uc003mza.2_5end | ||
|cluster_id=chr6:10521618..10521627,+ | |||
|description=CAGE_peak_16_at_GCNT2_5end | |description=CAGE_peak_16_at_GCNT2_5end | ||
|id=chr6:10521618..10521627,+ | |id=chr6:10521618..10521627,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.72e-15!254;CL:0000039!2.43e-09!7;CL:0000586!2.43e-09!7;CL:0000223!6.21e-08!59;CL:0000083!7.78e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.72e-15!254;CL:0000039!2.43e-09!7;CL:0000586!2.43e-09!7;CL:0000223!6.21e-08!59;CL:0000083!7.78e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.79e-20;7!CL:0000586;3.79e-20;7!CL:0002253;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.10e-20,7;CL:0000586,5.10e-20,7;CL:0002253,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.97e-17;1!UBERON:0010226;1.53e-16;1!UBERON:0009117;5.11e-07;10!UBERON:0005564;5.11e-07;10 | |||
|ontology_enrichment_disease=DOID:305!7.33e-11!106;DOID:0050687!6.23e-08!143;DOID:1793!7.78e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:178;1.53e-16;1!DOID:326;1.53e-16;1!DOID:3978;1.53e-16;1!DOID:3394;1.53e-16;1!DOID:5844;1.53e-16;1!DOID:114;6.17e-09;2!DOID:3095;8.18e-07;22!DOID:2994;8.18e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.04e-16,1;DOID:326,1.04e-16,1;DOID:3978,1.04e-16,1;DOID:3394,1.04e-16,1;DOID:5844,1.04e-16,1;DOID:114,5.08e-09,2;DOID:3095,8.96e-07,22;DOID:2994,8.96e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;5.97e-17;1!UBERON:0005623;5.97e-17;1!UBERON:0002084;1.53e-16;1!UBERON:0002082;1.53e-16;1!UBERON:0007100;3.64e-10;25!UBERON:0000473;1.47e-08;8!UBERON:0000948;6.41e-07;22!UBERON:0003101;8.18e-07;22!UBERON:0000079;8.18e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,5.53e-17,1;UBERON:0005623,5.53e-17,1;UBERON:0002084,1.41e-16,1;UBERON:0002082,1.41e-16,1;UBERON:0010226,1.41e-16,1;UBERON:0007100,1.85e-09,27;UBERON:0000473,1.47e-08,8;UBERON:0003101,8.27e-07,22;UBERON:0000079,8.27e-07,22 | |||
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| ||
|short_description=p16@GCNT2 | |short_description=p16@GCNT2 | ||
}} | }} |
Latest revision as of 13:32, 19 September 2015
Short description: | p16@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000489819, uc003mza.2_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.10e-20 | 7 |
germ cell | 5.10e-20 | 7 |
epithelial cell of large intestine | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 5.53e-17 | 1 |
semi-lunar valve | 5.53e-17 | 1 |
heart left ventricle | 1.41e-16 | 1 |
cardiac ventricle | 1.41e-16 | 1 |
future cardiac ventricle | 1.41e-16 | 1 |
primary circulatory organ | 1.85e-09 | 27 |
testis | 1.47e-08 | 8 |
male organism | 8.27e-07 | 22 |
male reproductive system | 8.27e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.04e-16 | 1 |
ischemia | 1.04e-16 | 1 |
extrinsic cardiomyopathy | 1.04e-16 | 1 |
myocardial ischemia | 1.04e-16 | 1 |
myocardial infarction | 1.04e-16 | 1 |
heart disease | 5.08e-09 | 2 |
germ cell and embryonal cancer | 8.96e-07 | 22 |
germ cell cancer | 8.96e-07 | 22 |