FFCP PHASE1:Hg19::chr5:95067060..95067082,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt=O94955 | |UniProt=O94955 | ||
|association_with_transcript=181bp_to_ENST00000379982_5end | |association_with_transcript=181bp_to_ENST00000379982_5end | ||
|cluster_id=chr5:95067060..95067082,+ | |||
|coexpression_cluster_id=C1085 | |||
|description=CAGE_peak_3_at_RHOBTB3_5end | |description=CAGE_peak_3_at_RHOBTB3_5end | ||
|id=chr5:95067060..95067082,+ | |id=chr5:95067060..95067082,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.86e-19!180;CL:0000680!4.61e-12!57;CL:0000056!4.61e-12!57;CL:0000355!4.61e-12!57;CL:0000187!2.18e-11!54;CL:0000183!9.66e-11!59;CL:0000192!5.29e-10!42;CL:0000514!5.29e-10!42;CL:0000057!6.01e-10!75;CL:0000393!9.76e-10!60;CL:0000211!9.76e-10!60;CL:0000359!7.03e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.86e-19!180;CL:0000680!4.61e-12!57;CL:0000056!4.61e-12!57;CL:0000355!4.61e-12!57;CL:0000187!2.18e-11!54;CL:0000183!9.66e-11!59;CL:0000192!5.29e-10!42;CL:0000514!5.29e-10!42;CL:0000057!6.01e-10!75;CL:0000393!9.76e-10!60;CL:0000211!9.76e-10!60;CL:0000359!7.03e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.94e-07;43!CL:0000187;2.25e-07;55!CL:0000136;3.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.10e-12,58;CL:0000056,1.10e-12,58;CL:0000355,1.10e-12,58;CL:0000187,5.47e-12,55;CL:0000192,1.46e-10,43;CL:0000514,1.46e-10,43;CL:0000057,2.76e-10,76;CL:0000393,2.85e-10,61;CL:0000211,2.85e-10,61;CL:0000359,4.86e-07,32;CL:0000136,8.88e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.94e-07;43!CL:0000355;7.88e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.00e-24!365;UBERON:0000481!1.75e-19!347;UBERON:0000477!4.25e-17!286;UBERON:0005743!8.21e-17!86;UBERON:0001017!3.36e-16!82;UBERON:0000119!4.08e-16!312;UBERON:0000483!5.07e-16!309;UBERON:0000955!5.69e-16!69;UBERON:0006238!5.69e-16!69;UBERON:0004111!1.16e-15!241;UBERON:0000073!1.50e-15!94;UBERON:0001016!1.50e-15!94;UBERON:0002616!2.03e-15!59;UBERON:0000025!4.11e-15!194;UBERON:0000468!1.03e-14!659;UBERON:0001049!1.37e-14!57;UBERON:0005068!1.37e-14!57;UBERON:0006241!1.37e-14!57;UBERON:0007135!1.37e-14!57;UBERON:0000033!1.68e-14!123;UBERON:0003075!1.60e-13!86;UBERON:0007284!1.60e-13!86;UBERON:0000153!9.92e-13!129;UBERON:0007811!9.92e-13!129;UBERON:0004121!1.03e-12!169;UBERON:0001134!1.45e-12!61;UBERON:0002036!1.45e-12!61;UBERON:0003082!1.45e-12!61;UBERON:0002385!2.22e-12!63;UBERON:0001015!2.22e-12!63;UBERON:0000383!2.22e-12!63;UBERON:0003080!4.09e-12!42;UBERON:0000914!4.94e-12!83;UBERON:0002329!4.94e-12!83;UBERON:0003077!4.94e-12!83;UBERON:0003059!4.94e-12!83;UBERON:0007282!4.94e-12!83;UBERON:0009618!4.94e-12!83;UBERON:0007285!4.94e-12!83;UBERON:0002346!5.97e-12!90;UBERON:0002780!7.82e-12!41;UBERON:0001890!7.82e-12!41;UBERON:0006240!7.82e-12!41;UBERON:0000924!1.08e-11!173;UBERON:0006601!1.08e-11!173;UBERON:0000467!1.30e-11!625;UBERON:0005256!1.65e-11!143;UBERON:0000480!1.75e-11!626;UBERON:0004290!4.13e-11!70;UBERON:0003056!4.97e-11!61;UBERON:0001893!2.37e-10!34;UBERON:0007023!3.88e-10!115;UBERON:0002020!4.18e-10!34;UBERON:0003528!4.18e-10!34;UBERON:0002791!5.55e-10!33;UBERON:0001869!1.61e-09!32;UBERON:0002100!4.07e-09!216;UBERON:0002050!5.06e-09!605;UBERON:0005423!5.06e-09!605;UBERON:0000923!5.70e-09!604;UBERON:0005291!5.70e-09!604;UBERON:0006598!5.70e-09!604;UBERON:0002532!5.70e-09!604;UBERON:0000922!8.14e-09!612;UBERON:0000062!2.12e-08!511;UBERON:0000064!5.82e-08!219;UBERON:0000486!6.53e-08!82;UBERON:0000490!7.65e-08!138;UBERON:0002619!7.30e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.28e-09;41!UBERON:0001890;3.28e-09;41!UBERON:0001893;5.07e-09;34!UBERON:0002791;6.07e-09;32!UBERON:0003528;8.29e-09;34!UBERON:0002020;8.29e-09;34!UBERON:0001869;9.13e-09;32!UBERON:0000073;4.95e-08;53!UBERON:0002616;4.95e-08;53!UBERON:0001017;1.67e-07;75!UBERON:0000955;4.65e-07;68!UBERON:0002619;5.11e-07;22!UBERON:0000956;9.53e-07;25!UBERON:0000203;9.53e-07;25 | |||
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| ||
|short_description=p3@RHOBTB3 | |short_description=p3@RHOBTB3 | ||
}} | }} |
Latest revision as of 07:47, 19 September 2015
Short description: | p3@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RHOBTB3_5end |
Coexpression cluster: | C1085_liposarcoma_placenta_Olfactory_amniotic_Hair_mesothelioma_Smooth |
Association with transcript: | 181bp_to_ENST00000379982_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | O94955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.10e-12 | 58 |
myoblast | 1.10e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-12 | 58 |
muscle cell | 5.47e-12 | 55 |
smooth muscle cell | 1.46e-10 | 43 |
smooth muscle myoblast | 1.46e-10 | 43 |
fibroblast | 2.76e-10 | 76 |
electrically responsive cell | 2.85e-10 | 61 |
electrically active cell | 2.85e-10 | 61 |
vascular associated smooth muscle cell | 4.86e-07 | 32 |
fat cell | 8.88e-07 | 15 |