FFCP PHASE1:Hg19::chr1:56990206..56990220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:56990206..56990220,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56990206..56990220,- | |description=CAGE_peak_at_chr1:56990206..56990220,- | ||
|id=chr1:56990206..56990220,- | |id=chr1:56990206..56990220,- | ||
|ontology_enrichment_celltype=CL:0000057!2.13e-11!75;CL:0000055!3.04e-09!180 | |ontology_enrichment_celltype=CL:0000057!2.13e-11!75;CL:0000055!3.04e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000135;7.66e-19;3!CL:0000388;7.66e-19;3!CL:0000153;2.84e-16;9!CL:0000447;2.84e-16;9!CL:0002617;1.76e-12;2!CL:0000499;1.99e-12;28!CL:0002559;4.00e-11;5!CL:0000327;1.14e-09;15!CL:0000214;3.40e-09;3!CL:0000138;3.50e-09;6!CL:0000346;1.00e-08;3!CL:1000428;1.00e-08;3!CL:0000515;2.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.70e-19,3;CL:0000388,5.70e-19,3;CL:0000153,3.14e-16,9;CL:0000447,3.14e-16,9;CL:0002617,9.55e-13,2;CL:0000499,1.94e-12,28;CL:0002559,3.94e-11,5;CL:0000327,1.21e-09,15;CL:0000214,3.40e-09,3;CL:0000058,3.81e-09,6;CL:0000138,3.81e-09,6;CL:0000346,9.09e-09,3;CL:1000428,9.09e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.97e-07;1!UBERON:0003852;1.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.95e-09!365;UBERON:0000468!3.83e-09!659 | |ontology_enrichment_uberon=UBERON:0000475!1.95e-09!365;UBERON:0000468!3.83e-09!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.66e-19;3!UBERON:0000043;7.66e-19;3!UBERON:0007845;7.66e-19;3!UBERON:0002073;4.00e-11;5!UBERON:0004457;7.40e-11;9!UBERON:0000042;7.40e-11;9!UBERON:0006915;3.40e-09;3!UBERON:0007616;3.40e-09;3!UBERON:0002217;3.40e-09;3!UBERON:0002018;3.40e-09;3!UBERON:0000412;1.00e-08;3!UBERON:0001992;1.00e-08;3!UBERON:0005705;1.97e-07;1!UBERON:0008193;1.97e-07;1!UBERON:0010912;1.97e-07;1!UBERON:0002514;1.97e-07;1!UBERON:0003457;1.97e-07;1!UBERON:0008907;1.97e-07;1!UBERON:0008001;1.97e-07;1!UBERON:0007213;1.97e-07;1!UBERON:0009891;1.97e-07;1!UBERON:0007914;1.97e-07;1!UBERON:0007375;1.97e-07;1!UBERON:0003323;1.97e-07;1!UBERON:0010258;1.97e-07;1!UBERON:0005253;1.97e-07;1!UBERON:0007842;1.97e-07;1!UBERON:0002397;1.97e-07;1!UBERON:0003113;1.97e-07;1!UBERON:0003277;1.97e-07;1!UBERON:0001709;1.97e-07;1!UBERON:0002244;1.97e-07;1!UBERON:0005620;1.97e-07;1!UBERON:0010364;1.97e-07;1!UBERON:0004288;1.97e-07;1!UBERON:0004905;3.02e-07;8!UBERON:0000982;3.02e-07;8!UBERON:0004770;3.02e-07;8!UBERON:0005795;6.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.70e-19,3;UBERON:0000043,5.70e-19,3;UBERON:0007845,5.70e-19,3;UBERON:0002073,3.94e-11,5;UBERON:0005086,3.94e-11,5;UBERON:0006915,3.40e-09,3;UBERON:0007616,3.40e-09,3;UBERON:0002217,3.40e-09,3;UBERON:0002018,3.40e-09,3;UBERON:0000412,9.09e-09,3;UBERON:0001992,9.09e-09,3;UBERON:0004457,4.32e-08,12;UBERON:0000042,4.32e-08,12;UBERON:0005705,1.75e-07,1;UBERON:0008193,1.75e-07,1;UBERON:0010912,1.75e-07,1;UBERON:0002514,1.75e-07,1;UBERON:0003457,1.75e-07,1;UBERON:0008907,1.75e-07,1;UBERON:0008001,1.75e-07,1;UBERON:0007213,1.75e-07,1;UBERON:0009891,1.75e-07,1;UBERON:0007914,1.75e-07,1;UBERON:0009292,1.75e-07,1;UBERON:0003099,1.75e-07,1;UBERON:0007375,1.75e-07,1;UBERON:0003323,1.75e-07,1;UBERON:0010258,1.75e-07,1;UBERON:0007842,1.75e-07,1;UBERON:0009494,1.75e-07,1;UBERON:0010042,1.75e-07,1;UBERON:0010045,1.75e-07,1;UBERON:0010259,1.75e-07,1;UBERON:0010359,1.75e-07,1;UBERON:0009526,1.75e-07,1;UBERON:0002397,1.75e-07,1;UBERON:0003113,1.75e-07,1;UBERON:0003277,1.75e-07,1;UBERON:0001709,1.75e-07,1;UBERON:0004066,1.75e-07,1;UBERON:0002244,1.75e-07,1;UBERON:0005620,1.75e-07,1;UBERON:0004362,1.75e-07,1;UBERON:0010364,1.75e-07,1;UBERON:0010046,1.75e-07,1;UBERON:0005868,1.75e-07,1;UBERON:0007238,1.75e-07,1;UBERON:0004288,1.75e-07,1;UBERON:0004068,1.75e-07,1;UBERON:0010334,1.75e-07,1;UBERON:0003852,1.75e-07,1;UBERON:0010253,1.75e-07,1;UBERON:0004905,2.58e-07,8;UBERON:0000982,2.58e-07,8;UBERON:0004770,2.58e-07,8 | |||
|phase1_expression=1.99846217197612,2.78330681058278,0.281908808191942,3.00219895059391,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.37129905888014,1.98838425436749,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.80719576192283,1.00267582127178,3.18662341713812,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.61246251376468,0,0.619954687054593,2.37600571456411,2.22540236350701,0,0,0,0.250237039743928,0,0.438977620880838,2.14541457059314,0.751190294532984,0,0.358779271377724,0.427114777637135,0.635795703478686,0,0.515262646192195,0.772921620136887,0.18611685633159,0.337552664482532,0.292311015483596,0,0.828449087780694,2.90962902273861,0,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,3.21620469096443,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,1.43833425785268,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0,1.60586089917446,0.315404830067869,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,1.40330047216537,0.256278298511402,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0.870100163485371,0.255679882248303,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.539617372749944,0.823611089208164,0.117812402345686,0,0,0,0.48763373908959,0.731140468893853,0,0,0.707027159768564,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0,0,6.75544432952525,6.58589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0.482259445395058,0.550157746388935,0,0,0,0.0607495566580247,0,0.315222829196793,0,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,1.02232813071253,0.113312091520126,0,1.32506888912221,0.129282956361551,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0.732157589411779,0.250381861413,0,0,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.50313580350515,2.66943366478961,0.228840068396924,0.302461847526478,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,2.06037423109676,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,3.52675943690684,0.918736432059601,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0.203909198930495,0.263091094251396,0,0,0.235479278551542,0,0,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.735444965261716,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,2.97596014533401,10.1678638298912,3.46101249699031,0,0.109265571963696,0.126698501011437,0.203977659483963,0,0,0.50141507858475,0.454672189309436,0,0,0.20686599172379,0.852935927603924,0.952257725854961,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0.4354334957939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|phase1_expression=1.99846217197612,2.78330681058278,0.281908808191942,3.00219895059391,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.37129905888014,1.98838425436749,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.80719576192283,1.00267582127178,3.18662341713812,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.61246251376468,0,0.619954687054593,2.37600571456411,2.22540236350701,0,0,0,0.250237039743928,0,0.438977620880838,2.14541457059314,0.751190294532984,0,0.358779271377724,0.427114777637135,0.635795703478686,0,0.515262646192195,0.772921620136887,0.18611685633159,0.337552664482532,0.292311015483596,0,0.828449087780694,2.90962902273861,0,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,3.21620469096443,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,1.43833425785268,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0,1.60586089917446,0.315404830067869,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,1.40330047216537,0.256278298511402,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0.870100163485371,0.255679882248303,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.539617372749944,0.823611089208164,0.117812402345686,0,0,0,0.48763373908959,0.731140468893853,0,0,0.707027159768564,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0,0,6.75544432952525,6.58589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0.482259445395058,0.550157746388935,0,0,0,0.0607495566580247,0,0.315222829196793,0,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,1.02232813071253,0.113312091520126,0,1.32506888912221,0.129282956361551,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0.732157589411779,0.250381861413,0,0,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.50313580350515,2.66943366478961,0.228840068396924,0.302461847526478,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,2.06037423109676,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,3.52675943690684,0.918736432059601,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0.203909198930495,0.263091094251396,0,0,0.235479278551542,0,0,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.735444965261716,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,2.97596014533401,10.1678638298912,3.46101249699031,0,0.109265571963696,0.126698501011437,0.203977659483963,0,0,0.50141507858475,0.454672189309436,0,0,0.20686599172379,0.852935927603924,0.952257725854961,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0.4354334957939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| ||
|short_description=p@chr1:56990206..56990220,- | |short_description=p@chr1:56990206..56990220,- | ||
}} | }} |
Latest revision as of 09:19, 28 July 2015
Short description: | p@chr1:56990206..56990220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56990206..56990220, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.70e-19 | 3 |
tendon cell | 5.70e-19 | 3 |
GAG secreting cell | 3.14e-16 | 9 |
carbohydrate secreting cell | 3.14e-16 | 9 |
adipocyte of breast | 9.55e-13 | 2 |
stromal cell | 1.94e-12 | 28 |
hair follicle cell | 3.94e-11 | 5 |
extracellular matrix secreting cell | 1.21e-09 | 15 |
synovial cell | 3.40e-09 | 3 |
chondroblast | 3.81e-09 | 6 |
chondrocyte | 3.81e-09 | 6 |
hair follicle dermal papilla cell | 9.09e-09 | 3 |
stem cell of epidermis | 9.09e-09 | 3 |