FFCP PHASE1:Hg19::chr12:90354099..90354111,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:90354099..90354111,-
|short_description=p@chr12:90354099..90354111,-
|description=CAGE_peak_at_chr12:90354099..90354111,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:90354099..90354111,- | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr12:90354099..90354111,- | |||
|id=chr12:90354099..90354111,- | |||
|ontology_enrichment_celltype=CL:0000738!7.06e-27!140;CL:0002031!2.74e-26!124;CL:0002087!6.16e-26!119;CL:0002032!2.39e-21!165;CL:0000837!2.39e-21!165;CL:0000037!4.35e-20!172;CL:0000566!4.35e-20!172;CL:0000988!1.21e-19!182;CL:0002057!1.31e-19!42;CL:0000860!5.21e-18!45;CL:0002009!1.16e-15!65;CL:0002194!1.64e-14!63;CL:0000576!1.64e-14!63;CL:0000040!1.64e-14!63;CL:0000559!1.64e-14!63;CL:0000557!6.25e-14!71;CL:0000838!9.66e-13!52;CL:0000839!1.30e-12!70;CL:0000542!1.99e-12!53;CL:0000051!1.99e-12!53;CL:0000766!2.91e-11!76;CL:0000453!1.98e-10!5;CL:0000945!3.66e-10!24;CL:0000826!3.66e-10!24;CL:0000763!5.97e-10!112;CL:0000049!5.97e-10!112;CL:0000990!1.20e-08!8;CL:0000134!2.65e-08!358;CL:0002320!5.97e-08!365;CL:0000451!5.11e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.74e-15;33!CL:0002057;3.74e-15;33!CL:0000945;1.90e-10;24!CL:0000473;1.18e-09;39!CL:0000234;1.18e-09;39!CL:0000576;1.32e-08;48!CL:0002087;2.73e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.60e-17,42;CL:0002057,1.60e-17,42;CL:0000473,2.78e-15,48;CL:0000234,2.78e-15,48;CL:0002087,6.39e-15,115;CL:0002031,2.91e-14,120;CL:0000738,1.78e-12,136;CL:0002194,3.86e-12,59;CL:0000576,3.86e-12,59;CL:0000040,3.86e-12,59;CL:0000559,3.86e-12,59;CL:0002009,9.84e-12,61;CL:0000839,8.00e-11,66;CL:0000557,1.17e-10,67;CL:0002032,2.20e-10,161;CL:0000837,2.20e-10,161;CL:0000945,2.32e-10,24;CL:0000826,2.32e-10,24;CL:0000037,6.58e-10,168;CL:0000766,6.80e-10,72;CL:0000988,2.38e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-12!102;UBERON:0003061!1.27e-12!102;UBERON:0002371!7.94e-12!80;UBERON:0002193!5.51e-11!112;UBERON:0001474!1.13e-10!86;UBERON:0002405!1.39e-10!115;UBERON:0004765!2.11e-08!101;UBERON:0001434!2.11e-08!101;UBERON:0002384!4.51e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.35e-09,76;UBERON:0001474,1.21e-08,82;UBERON:0004765,7.76e-08,90;UBERON:0002405,1.43e-07,93;UBERON:0002390,3.68e-07,98;UBERON:0003061,3.68e-07,98;UBERON:0001434,5.23e-07,100 | |||
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| ||
|short_description=p@chr12:90354099..90354111,- | |||
}} | }} |
Latest revision as of 13:25, 24 July 2015
Short description: | p@chr12:90354099..90354111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:90354099..90354111, - |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.60e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.60e-17 | 42 |
defensive cell | 2.78e-15 | 48 |
phagocyte | 2.78e-15 | 48 |
nongranular leukocyte | 6.39e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.91e-14 | 120 |
leukocyte | 1.78e-12 | 136 |
monopoietic cell | 3.86e-12 | 59 |
monocyte | 3.86e-12 | 59 |
monoblast | 3.86e-12 | 59 |
promonocyte | 3.86e-12 | 59 |
macrophage dendritic cell progenitor | 9.84e-12 | 61 |
myeloid lineage restricted progenitor cell | 8.00e-11 | 66 |
granulocyte monocyte progenitor cell | 1.17e-10 | 67 |
hematopoietic oligopotent progenitor cell | 2.20e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-10 | 161 |
lymphocyte of B lineage | 2.32e-10 | 24 |
pro-B cell | 2.32e-10 | 24 |
hematopoietic stem cell | 6.58e-10 | 168 |
myeloid leukocyte | 6.80e-10 | 72 |
hematopoietic cell | 2.38e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.35e-09 | 76 |
bone element | 1.21e-08 | 82 |
skeletal element | 7.76e-08 | 90 |
immune system | 1.43e-07 | 93 |
hematopoietic system | 3.68e-07 | 98 |
blood island | 3.68e-07 | 98 |
skeletal system | 5.23e-07 | 100 |