FFCP PHASE1:Hg19::chr1:54355430..54355495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54432 | |EntrezGene=54432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25231 | |HGNC=25231 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y548 | |UniProt=Q9Y548 | ||
|association_with_transcript=0bp_to_ENST00000072644,ENST00000371399,ENST00000464950,ENST00000465897,ENST00000469457,ENST00000472983,ENST00000480151,NM_018982,NR_036639,NR_036640,uc001cvu.2,uc001cvv.2,uc001cvw.2,uc001cvx.2,uc001cvy.2_5end | |association_with_transcript=0bp_to_ENST00000072644,ENST00000371399,ENST00000464950,ENST00000465897,ENST00000469457,ENST00000472983,ENST00000480151,NM_018982,NR_036639,NR_036640,uc001cvu.2,uc001cvv.2,uc001cvw.2,uc001cvx.2,uc001cvy.2_5end | ||
|cluster_id=chr1:54355430..54355495,- | |||
|description=CAGE_peak_1_at_YIPF1_5end | |description=CAGE_peak_1_at_YIPF1_5end | ||
|id=chr1:54355430..54355495,- | |id=chr1:54355430..54355495,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-16!115;UBERON:0000467!5.11e-15!625;UBERON:0000480!7.20e-15!626;UBERON:0000922!7.75e-14!612;UBERON:0000468!2.02e-13!659;UBERON:0000923!2.03e-13!604;UBERON:0005291!2.03e-13!604;UBERON:0006598!2.03e-13!604;UBERON:0002532!2.03e-13!604;UBERON:0002050!2.79e-13!605;UBERON:0005423!2.79e-13!605;UBERON:0000062!4.79e-09!511;UBERON:0004111!1.91e-08!241;UBERON:0000475!3.21e-07!365;UBERON:0001049!9.24e-07!57;UBERON:0005068!9.24e-07!57;UBERON:0006241!9.24e-07!57;UBERON:0007135!9.24e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!2.15e-16!115;UBERON:0000467!5.11e-15!625;UBERON:0000480!7.20e-15!626;UBERON:0000922!7.75e-14!612;UBERON:0000468!2.02e-13!659;UBERON:0000923!2.03e-13!604;UBERON:0005291!2.03e-13!604;UBERON:0006598!2.03e-13!604;UBERON:0002532!2.03e-13!604;UBERON:0002050!2.79e-13!605;UBERON:0005423!2.79e-13!605;UBERON:0000062!4.79e-09!511;UBERON:0004111!1.91e-08!241;UBERON:0000475!3.21e-07!365;UBERON:0001049!9.24e-07!57;UBERON:0005068!9.24e-07!57;UBERON:0006241!9.24e-07!57;UBERON:0007135!9.24e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.77e-16,114;UBERON:0002050,1.94e-14,564;UBERON:0005423,1.27e-13,581;UBERON:0000923,1.56e-13,560;UBERON:0010316,1.56e-13,560;UBERON:0005291,1.56e-13,560;UBERON:0006598,1.56e-13,560;UBERON:0010317,1.56e-13,560;UBERON:0002532,1.56e-13,560;UBERON:0000922,3.16e-13,592;UBERON:0004111,5.02e-08,240 | |||
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| ||
|short_description=p1@YIPF1 | |short_description=p1@YIPF1 | ||
}} | }} |
Latest revision as of 14:09, 18 September 2015
Short description: | p1@YIPF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YIPF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000072644, ENST00000371399, ENST00000464950, ENST00000465897, ENST00000469457, ENST00000472983, ENST00000480151, NM_018982, NR_036639, NR_036640, uc001cvu.2, uc001cvv.2, uc001cvw.2, uc001cvx.2, uc001cvy.2_5end |
EntrezGene: | YIPF1 |
HGNC: | 25231 |
UniProt: | Q9Y548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.77e-16 | 114 |
embryonic structure | 1.94e-14 | 564 |
developing anatomical structure | 1.27e-13 | 581 |
germ layer | 1.56e-13 | 560 |
germ layer / neural crest | 1.56e-13 | 560 |
embryonic tissue | 1.56e-13 | 560 |
presumptive structure | 1.56e-13 | 560 |
germ layer / neural crest derived structure | 1.56e-13 | 560 |
epiblast (generic) | 1.56e-13 | 560 |
embryo | 3.16e-13 | 592 |
anatomical conduit | 5.02e-08 | 240 |