FFCP PHASE1:Hg19::chr12:90049828..90049847,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:90049828..90049847,-
|short_description=p15@ATP2B1
|description=CAGE_peak_15_at_ATP2B1_5end
|association_with_transcript=0bp_to_ENST00000261173,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=490 | |EntrezGene=490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=814 | |HGNC=814 | ||
|TSSclassifier=strong | |||
|UniProt=P20020 | |UniProt=P20020 | ||
|association_with_transcript=0bp_to_ENST00000261173,ENST00000348959,NM_001001323,NM_001682,uc001tbg.2,uc001tbh.2_5end | |||
|cluster_id=chr12:90049828..90049847,- | |||
|coexpression_cluster_id=C1180 | |||
|description=CAGE_peak_15_at_ATP2B1_5end | |||
|id=chr12:90049828..90049847,- | |||
|ontology_enrichment_celltype=CL:0000860!1.79e-25!45;CL:0002057!4.13e-25!42;CL:0002194!1.95e-17!63;CL:0000576!1.95e-17!63;CL:0000040!1.95e-17!63;CL:0000559!1.95e-17!63;CL:0002009!2.31e-17!65;CL:0000766!5.42e-16!76;CL:0000557!7.53e-15!71;CL:0000839!2.17e-14!70;CL:0002087!6.87e-11!119;CL:0000738!2.14e-10!140;CL:0002031!9.81e-10!124;CL:0000763!1.97e-08!112;CL:0000049!1.97e-08!112;CL:0002032!7.41e-07!165;CL:0000837!7.41e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-67;33!CL:0002057;3.53e-67;33!CL:0000473;9.09e-48;39!CL:0000234;9.09e-48;39!CL:0000576;4.15e-33;48!CL:0000766;6.05e-23;69!CL:0000775;4.74e-15;3!CL:0000763;3.47e-14;100!CL:0002087;4.47e-10;104!CL:0000094;1.36e-09;8!CL:0000738;3.38e-09;136!CL:0000515;5.11e-07;3!CL:0000081;5.49e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.45e-64,42;CL:0002057,4.45e-64,42;CL:0000473,2.50e-55,48;CL:0000234,2.50e-55,48;CL:0000766,1.55e-47,72;CL:0002194,4.45e-43,59;CL:0000576,4.45e-43,59;CL:0000040,4.45e-43,59;CL:0000559,4.45e-43,59;CL:0002009,1.69e-41,61;CL:0000839,5.86e-38,66;CL:0000557,2.59e-37,67;CL:0000763,1.24e-29,108;CL:0000049,1.24e-29,108;CL:0000738,8.36e-26,136;CL:0002087,4.87e-23,115;CL:0002031,7.91e-22,120;CL:0002032,9.58e-21,161;CL:0000837,9.58e-21,161;CL:0000037,1.35e-19,168;CL:0000988,2.97e-18,177;CL:0000775,4.33e-15,3;CL:0000094,1.35e-09,8;CL:0000134,8.54e-08,354;CL:0002320,1.67e-07,361;CL:0000081,5.46e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-47;42!CL:0000049;2.39e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.76e-13!80;UBERON:0004765!4.24e-13!101;UBERON:0001434!4.24e-13!101;UBERON:0001474!1.05e-12!86;UBERON:0002390!4.80e-09!102;UBERON:0003061!4.80e-09!102;UBERON:0002204!3.53e-08!167;UBERON:0001869!1.22e-07!32;UBERON:0003080!1.31e-07!42;UBERON:0002405!1.75e-07!115;UBERON:0002780!4.01e-07!41;UBERON:0001890!4.01e-07!41;UBERON:0006240!4.01e-07!41;UBERON:0002193!4.80e-07!112;UBERON:0002619!6.19e-07!22;UBERON:0001893!9.45e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;8.04e-07;3!UBERON:0005382;8.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.93e-32,76;UBERON:0001474,1.68e-29,82;UBERON:0004765,2.18e-26,90;UBERON:0002405,2.34e-25,93;UBERON:0002390,8.84e-24,98;UBERON:0003061,8.84e-24,98;UBERON:0001434,3.42e-23,100;UBERON:0002193,4.64e-21,108;UBERON:0002204,4.24e-14,167;UBERON:0003081,1.34e-08,203;UBERON:0002384,4.16e-07,371;UBERON:0005383,6.14e-07,3;UBERON:0005382,6.14e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,1.80490002723128,0.217010870715852,0,0,0.257575567634187,1.89017710413434,1.51150377475524,1.21292030593908,3.95129362739664,3.28934310417461,0.619412741790207,2.01384674625505,1.5369642391746,0.47296445977717,2.75796544589295,2.5819387343353,2.70852973188684,3.9530891303947,1.63743690034707,0.674170453335254,3.36692281607993,1.60464513538047,2.55734850319616,1.31940520074686,0.598390972864896,0.426224750532694,10.1573233520004,3.97169657283798,3.73693349397345,3.51748131359441,7.82224377630302,0.65156653411535,3.63239701580021,1.10483290796269,3.48108626184973,0,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.32145117339416,0,0.19891667719909,0.730656615058536,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.786021525498329,1.02800749499755,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,1.06976078313403,0.724122019413995,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0.24666754841716,0.622422070799533,0,0,0,0,0,0,0,0,0.587172493218824,0,0.140450806702248,0.204154171254893,0,0.516628905878827,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0.423863802319124,0,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0.71181185733329,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.358234090811393,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0.579125226670317,2.26023954805422,1.61154866915906,0.112085143993527,0.197030760201927,0.431255149719035,0,0,0,0,0,0,4.49404214368309,2.99161459204025,2.48649308061621,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.256278298511402,0.511707249066704,0.965123526861645,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0.120859449591622,0,0.644566922551274,0.229628896329213,0.728364672026868,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.48335359146061,0,0.15350367472613,0.137836572484531,0,0.435050081742686,0.170453254832202,0.178064071293475,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0.78494864019923,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0.994147647766298,0.562677665642051,0.222617410045812,0,0,0.19924798825107,0,0.503865495708552,0,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.649376687132959,0,0.7812832832557,0,0.724999575434793,0.341380344856499,0.508507300585533,0,0,0,0,1.77148277162768,0.120596438625408,1.52581736317083,0.110579259931225,0.886642856860642,0,0.10893846351899,0,0,0.113942055847001,0.23056390438806,0,0.434589487688032,0,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0.335643173951685,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0,0,0,0.123563938946503,0,0,0,1.1713222286267,0.547364367646998,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.379864775735272,0,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0.14405479798815,0,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.576911008668165,0,0.78741985211799,0,0.795229689809303,0.408610218334727,0,0,0,0.449947783103001,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0.681552087141687,0.226624183040251,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0.48717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| ||
|short_description=p15@ATP2B1 | |||
}} | }} |
Latest revision as of 18:25, 15 September 2015
Short description: | p15@ATP2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ATP2B1_5end |
Coexpression cluster: | C1180_CD14_mesenchymal_medial_Neutrophils_Myoblast_caudate_parietal |
Association with transcript: | 0bp_to_ENST00000261173, ENST00000348959, NM_001001323, NM_001682, uc001tbg.2, uc001tbh.2_5end |
EntrezGene: | ATP2B1 |
HGNC: | 814 |
UniProt: | P20020 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.45e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.45e-64 | 42 |
defensive cell | 2.50e-55 | 48 |
phagocyte | 2.50e-55 | 48 |
myeloid leukocyte | 1.55e-47 | 72 |
monopoietic cell | 4.45e-43 | 59 |
monocyte | 4.45e-43 | 59 |
monoblast | 4.45e-43 | 59 |
promonocyte | 4.45e-43 | 59 |
macrophage dendritic cell progenitor | 1.69e-41 | 61 |
myeloid lineage restricted progenitor cell | 5.86e-38 | 66 |
granulocyte monocyte progenitor cell | 2.59e-37 | 67 |
myeloid cell | 1.24e-29 | 108 |
common myeloid progenitor | 1.24e-29 | 108 |
leukocyte | 8.36e-26 | 136 |
nongranular leukocyte | 4.87e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 7.91e-22 | 120 |
hematopoietic oligopotent progenitor cell | 9.58e-21 | 161 |
hematopoietic multipotent progenitor cell | 9.58e-21 | 161 |
hematopoietic stem cell | 1.35e-19 | 168 |
hematopoietic cell | 2.97e-18 | 177 |
neutrophil | 4.33e-15 | 3 |
granulocyte | 1.35e-09 | 8 |
mesenchymal cell | 8.54e-08 | 354 |
connective tissue cell | 1.67e-07 | 361 |
blood cell | 5.46e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.93e-32 | 76 |
bone element | 1.68e-29 | 82 |
skeletal element | 2.18e-26 | 90 |
immune system | 2.34e-25 | 93 |
hematopoietic system | 8.84e-24 | 98 |
blood island | 8.84e-24 | 98 |
skeletal system | 3.42e-23 | 100 |
hemolymphoid system | 4.64e-21 | 108 |
musculoskeletal system | 4.24e-14 | 167 |
lateral plate mesoderm | 1.34e-08 | 203 |
connective tissue | 4.16e-07 | 371 |
caudate-putamen | 6.14e-07 | 3 |
dorsal striatum | 6.14e-07 | 3 |