FFCP PHASE1:Hg19::chr12:90049810..90049823,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:90049810..90049823,-
|short_description=p18@ATP2B1
|description=CAGE_peak_18_at_ATP2B1_5end
|association_with_transcript=-14bp_to_ENST00000549585_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=490 | |EntrezGene=490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=814 | |HGNC=814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000549585_5end | |||
|cluster_id=chr12:90049810..90049823,- | |||
|coexpression_cluster_id=C1180 | |||
|description=CAGE_peak_18_at_ATP2B1_5end | |||
|id=chr12:90049810..90049823,- | |||
|ontology_enrichment_celltype=CL:0000860!2.03e-23!45;CL:0002057!1.12e-22!42;CL:0002194!2.28e-18!63;CL:0000576!2.28e-18!63;CL:0000040!2.28e-18!63;CL:0000559!2.28e-18!63;CL:0002009!2.65e-17!65;CL:0000839!7.45e-16!70;CL:0000766!1.32e-14!76;CL:0000557!1.66e-14!71;CL:0002087!1.27e-10!119;CL:0002031!1.56e-09!124;CL:0000763!1.28e-08!112;CL:0000049!1.28e-08!112;CL:0000738!4.09e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-53;33!CL:0002057;2.25e-53;33!CL:0000473;2.20e-40;39!CL:0000234;2.20e-40;39!CL:0000576;4.54e-25;48!CL:0000766;1.61e-16;69!CL:0000763;4.45e-09;100!CL:0002087;5.54e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.89e-46,42;CL:0002057,2.89e-46,42;CL:0000473,4.39e-40,48;CL:0000234,4.39e-40,48;CL:0002194,2.00e-31,59;CL:0000576,2.00e-31,59;CL:0000040,2.00e-31,59;CL:0000559,2.00e-31,59;CL:0002009,2.63e-30,61;CL:0000766,1.44e-28,72;CL:0000839,8.37e-28,66;CL:0000557,2.39e-27,67;CL:0000763,3.35e-20,108;CL:0000049,3.35e-20,108;CL:0002087,1.30e-16,115;CL:0002031,8.80e-16,120;CL:0000738,2.47e-15,136;CL:0002032,6.19e-14,161;CL:0000837,6.19e-14,161;CL:0000037,3.36e-13,168;CL:0000988,2.44e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.28e-37;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.35e-11!80;UBERON:0004765!5.37e-11!101;UBERON:0001434!5.37e-11!101;UBERON:0001474!2.04e-10!86;UBERON:0002390!1.04e-09!102;UBERON:0003061!1.04e-09!102;UBERON:0002193!6.71e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.02e-24,76;UBERON:0001474,8.12e-22,82;UBERON:0004765,1.30e-19,90;UBERON:0002405,6.99e-19,93;UBERON:0002390,9.20e-18,98;UBERON:0003061,9.20e-18,98;UBERON:0001434,2.40e-17,100;UBERON:0002193,7.83e-16,108;UBERON:0002204,2.12e-10,167;UBERON:0003081,6.10e-07,203 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0.242584061187816,2.55671940596253,3.70051099219643,1.54853185447552,1.43846196161075,1.2808035326455,0.945928919554341,2.06847408441971,3.22742341791913,1.35426486594342,2.44715041405386,0.818718450173537,0.674170453335254,2.44867113896722,0.962787081228281,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,5.80418477257168,0,3.11411124497787,2.51248665256743,5.21482918420201,0.434377689410233,4.23779651843358,2.20966581592539,1.26584954976354,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0.560677600142307,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0.570471821544449,0,0,0,0,0.61246251376468,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,1.25342674267927,0,0.197030760201927,0,0.128343036279748,0.508189248444927,2.60279707715243,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0.276242966807689,0.114814448164607,0.910455840033585,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0.290033387828457,0.340906509664404,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.1605880751037,1.00899853595524,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.347249989866585,0.885741385813839,0,3.05163472634166,0.110579259931225,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0,0.208843899010911,0,0,0,0.91227394607833,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0.52418000472609,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0.451961481561065,0.137041924646751,0,0.126621591911757,0.195551382734803,0,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.393709926058995,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.104909176269996,0,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0,0.342173675768659,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,2.68457782784319,0.250381861413,0,0,0,0.276697269872462,0,0,0.285465333544967,0.235265819698172,0,0,0,0.701139929541673,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0.829412415681711,0,2.08698024724694,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,2.40016658797892,0,0,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.179088841081487,0,0.657852148736121,0,0.38582807654183,0.168942440653073,0,0.345430341731199,0,0,0.194860308839388,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0.622077260032973,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.159633859057151,1.8460472781668,0.504143392443436,0,0.322951291263702,0,0,0,0,0,0,0,0,0.075210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| ||
|short_description=p18@ATP2B1 | |||
}} | }} |
Latest revision as of 18:22, 15 September 2015
Short description: | p18@ATP2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ATP2B1_5end |
Coexpression cluster: | C1180_CD14_mesenchymal_medial_Neutrophils_Myoblast_caudate_parietal |
Association with transcript: | -14bp_to_ENST00000549585_5end |
EntrezGene: | ATP2B1 |
HGNC: | 814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.89e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-46 | 42 |
defensive cell | 4.39e-40 | 48 |
phagocyte | 4.39e-40 | 48 |
monopoietic cell | 2.00e-31 | 59 |
monocyte | 2.00e-31 | 59 |
monoblast | 2.00e-31 | 59 |
promonocyte | 2.00e-31 | 59 |
macrophage dendritic cell progenitor | 2.63e-30 | 61 |
myeloid leukocyte | 1.44e-28 | 72 |
myeloid lineage restricted progenitor cell | 8.37e-28 | 66 |
granulocyte monocyte progenitor cell | 2.39e-27 | 67 |
myeloid cell | 3.35e-20 | 108 |
common myeloid progenitor | 3.35e-20 | 108 |
nongranular leukocyte | 1.30e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 8.80e-16 | 120 |
leukocyte | 2.47e-15 | 136 |
hematopoietic oligopotent progenitor cell | 6.19e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.19e-14 | 161 |
hematopoietic stem cell | 3.36e-13 | 168 |
hematopoietic cell | 2.44e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.02e-24 | 76 |
bone element | 8.12e-22 | 82 |
skeletal element | 1.30e-19 | 90 |
immune system | 6.99e-19 | 93 |
hematopoietic system | 9.20e-18 | 98 |
blood island | 9.20e-18 | 98 |
skeletal system | 2.40e-17 | 100 |
hemolymphoid system | 7.83e-16 | 108 |
musculoskeletal system | 2.12e-10 | 167 |
lateral plate mesoderm | 6.10e-07 | 203 |